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Fig. 7 | BMC Plant Biology

Fig. 7

From: Comparison of anther transcriptomes in response to cold stress at the reproductive stage between susceptible and resistant Japonica rice varieties

Fig. 7

Quantitative real-time PCR validated the relative expression levels of DEGs related to 0, 2, or 4 days of CST at the transcriptional level in LJ11 and LJ25. (a) Expression levels of the twelve DEGs between LJ11 and LJ25. The line graphs indicate the log2FPKM of DEGs derived from RNA-Seq data, while the bar graphs represent the relative expression levels of DEGs determined from qRT-PCR validation after 0, 2, or 4 days of CST. (b) Results of correlation analysis between RNA-seq and qRT-PCR. The scatterplots are comprised of red circles that were formed from the log2 fold change of RNA-seq (y-axis) and the fold change of qRT-PCR (x-axis). The R2 (the correlation coefficient between qRT-PCR and RNA-seq) and the equation (the linear regression relationship) were presented. (c) The relative expression levels of DEGs in LN98325 and LJ3013 during the reproductive stage under 0, 2, or 4 days of CST. Values are presented as the means (± SD) of three biological replicates. * represent p < 0.05, ** represent p < 0.01. Error bars represent the SD

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