Table 1 Predicted targets genes of peanut miRNAs in response to P deficiency

ahy-miR160-5p

AH18G04580

Auxin response factor 18

GO:0006355

GO:0009734

GO:0005634

GO:0003677

BP: regulation of transcription, DNA-templated

BP: auxin-activated signaling pathway

CC: nucleus

MF: DNA binding

ahy-miR160-5p

AH09G34380

Auxin response factor 16

GO:0006355

GO:0009734

GO:0005634

GO:0003677

BP: regulation of transcription, DNA-templated

BP: auxin-activated signaling pathway

CC: nucleus

MF: DNA binding

ahy-miR160-5p

AH10G14870

Auxin response factor 17

GO:0006355

GO:0009734

GO:0005634

GO:0003677

BP: regulation of transcription, DNA-templated

BP: auxin-activated signaling pathway

CC: nucleus

MF: DNA binding

ahy-miR160-5p

AH08G13420

Auxin response factor 18

GO:0006355

GO:0009734

GO:0005634

GO:0003677

BP: regulation of transcription, DNA-templated

BP: auxin-activated signaling pathway

CC: nucleus

MF: DNA binding

ahy-miR3515

AH10G30920

CST complex subunit STN1

GO:0016233

GO:0005634

GO:0000784

GO:0003676

GO:0003697

BP: telomere capping

CC: nucleus

CC: nuclear chromosome, telomeric region

MF: nucleic acid binding

MF: single-stranded DNA binding

ahy-miR3515

AH10G31890

Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha

GO:0009749

GO:0015979

GO:0005737

GO:0005829

GO:0047334

GO:0003872

GO:0046872

GO:0005524

GO:0008443

BP: response to glucose

BP: photosynthesis

CC: cytoplasm

CC: cytosol

MF: diphosphate-fructose-6-phosphate 1-phosphotransferase activity

MF: 6-phosphofructokinase activity

MF: metal ion binding

MF: ATP binding

MF: phosphofructokinase activity

ahy-miR3515

AH14G39110

Eukaryotic translation initiation factor 3 subunit H

GO:0009733

GO:0009744

GO:0034286

GO:0009737

GO:0009749

GO:0045948

GO:0001732

GO:0005852

GO:0016282

GO:0005829

GO:0033290

GO:0042788

GO:0008237

GO:0003743

BP: response to auxin

BP: response to sucrose

BP: response to maltose

BP: response to abscisic acid

BP: response to glucoseBP: positive regulation of translational initiation

BP: formation of cytoplasmic translation initiation complex

CC: eukaryotic translation initiation factor 3 complex

CC: eukaryotic 43S preinitiation complex

CC: cytosol

CC: eukaryotic 48S preinitiation complex

CC: polysomal ribosome

MF: metallopeptidase activity

MF: translation initiation factor activity

ahy-miR3515

AH13G55250

Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha

GO:0009749

GO:0015979

GO:0005737

GO:0005829

GO:0047334

GO:0003872

GO:0046872

GO:0005524

GO:0008443

BP: response to glucose

BP: photosynthesis

CC: cytoplasm

CC: cytosol

MF: diphosphate-fructose-6-phosphate 1-phosphotransferase activity

MF: 6-phosphofructokinase activity

MF: metal ion binding

MF: ATP binding

MF: phosphofructokinase activity

ahy-miR3518

AH15G29520

CRS2-associated factor 1, chloroplastic

GO:0003723

MF: RNA binding

ahy-miR3518

AH05G25950

CRS2-associated factor 1, chloroplastic

GO:0000373

GO:0003723

BP: Group II intron splicing

MF: RNA binding

ahy-miR3518

AH16G41080

Probable transcription factor KAN4

GO:0006355

GO:0005634

GO:0044212

GO:0003677

BP: regulation of transcription, DNA-templated

CC: nucleus

MF: transcription regulatory region DNA binding

MF: DNA binding

ahy-miR398

AH08G16610

Aconitate hydratase 3, mitochondrial

GO:0006099

GO:0006101

GO:0005829

GO:0005739

GO:0051539

GO:0047780

GO:0003994

BP: tricarboxylic acid cycle

BP: citrate metabolic process

CC: cytosol

CC: mitochondrion

MF: 4 iron, 4 sulfur cluster binding

MF: citrate dehydratase activity

MF: aconitate hydratase activity

ahy-miR398

AH13G11870

Putative glycerol-3-phosphate transporter 1

GO:0016021

GO:0022857

CC: integral component of membrane

MF: transmembrane transporter activity

ahy-miR398

AH03G29870

GMP synthase [glutamine-hydrolyzing]

GO:0006541

GO:0006177

GO:0005829

GO:0003921

GO:0003922

GO:0016462

GO:0005524

BP: glutamine metabolic process

BP: GMP biosynthetic process

CC: cytosol

MF: GMP synthase activity

MF: GMP synthas

MF: pyrophosphatase activity

MF: ATP binding

ahy-miR398

AH18G06970

Aconitate hydratase 3, mitochondrial

GO:0006099

GO:0006101

GO:0005829

GO:0005739

GO:0051539

GO:0047780

GO:0003994

BP: tricarboxylic acid cycle

BP: citrate metabolic process

CC: cytosol

CC: mitochondrion

MF: 4 iron, 4 sulfur cluster binding

MF: citrate dehydratase activity

MF: aconitate hydratase activity

ahy-miR398

AH03G09280

Putative glycerol-3-phosphate transporter 1

GO:0016021

GO:0022857

CC: integral component of membrane

MF: transmembrane transporter activity

ahy-miR408-3p

AH19G08390

Blue copper protein

GO:0046658

GO:0016021

GO:0009055

CC: anchored component of plasma membrane

CC: integral component of membrane

MF: electron carrier activity

ahy-miR408-3p

AH11G03260

Laccase-3

GO:0046274

GO:0006826

GO:0055072

GO:0048046

GO:0005886

GO:0052716

GO:0004322

GO:0005507

BP: lignin catabolic process

BP: iron ion transport

BP: iron ion homeostasis

CC: apoplast

CC: plasma membrane

MF: hydroquinon

MF: ferroxidase activity

MF: copper ion binding

ahy-miR408-3p

AH01G05360

Laccase-3

GO:0046274

GO:0006826

GO:0055072

GO:0048046

GO:0005886

GO:0052716

GO:0004322

GO:0005507

BP: lignin catabolic process

BP: iron ion transport

BP: iron ion homeostasis

CC: apoplast

CC: plasma membrane

MF: hydroquinon

MF: ferroxidase activity

MF: copper ion binding

ahy-miR408-3p

AH09G06680

Blue copper protein

GO:0046658

GO:0016021

GO:0009055

CC: anchored component of plasma membrane

CC: integral component of membrane

MF: electron carrier activity

ahy-miR408-5p

AH15G08030

Protein YLS3

GO:0006869

GO:0008289

BP: lipid transport

MF: lipid binding

ahy-miR408-5p

AH05G14850

Protein YLS3

GO:0006869

GO:0008289

BP: lipid transport

MF: lipid binding