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Table 8 Genetic diversity of A. tsaoko populations based on EST-SSR markers

From: De novo transcriptome assembly, gene annotation, and EST-SSR marker development of an important medicinal and edible crop, Amomum tsaoko (Zingiberaceae)

Population

PPB/%

Na

Ne

I

Ho

He

PAr

F

JP

100.000

4.000

2.662

1.078

0.573

0.582

0.167

− 0.009

PB

88.890

3.167

2.481

0.927

0.596

0.535

0.056

−0.110

LVC

100.000

4.111

2.714

1.073

0.584

0.578

0.167

−0.009

YY

100.000

4.000

2.747

1.086

0.576

0.591

0.056

0.015

LC

100.000

3.722

2.450

0.981

0.620

0.540

0.111

−0.140

YX

100.000

3.722

2.415

0.967

0.617

0.537

0.111

−0.145

Mean

98.150

3.787

2.578

1.019

0.594

0.560

0.111

−0.066

  1. PPB Percentage of polymorphic bands, Na observed number of alleles, Ne effective number of alleles, I Shannon’s information index, Ho observed heterozygosity, He expected heterozygosity, PAr number of private alleles, F Fixation index
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BMC Plant Biology

ISSN: 1471-2229

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