Table 5 Ten Highly Polymorphic regions among Clade C species
Region | Location | Nucleotide Diversity | Avg No. of Mutations | Region Length | Alignment Length |
|---|---|---|---|---|---|
rps8-rpl14 | IGS | 0.08516 | 19.0 | 213 | 297 |
rps15-ycf1 | IGS | 0.08223 | 26.0 | 294 | 645 |
ndhG-ndhI | IGS | 0.0783 | 24.9 | 281 | 458 |
psbK-psbI | IGS | 0.07146 | 26.4 | 231 | 441 |
ccsA-ndhD | IGS | 0.07077 | 15.2 | 194 | 248 |
rpl36-rps8 | IGS | 0.07028 | 32.8 | 441 | 554 |
petA-psbJ | IGS | 0.06852 | 63.2 | 834 | 1177 |
ndhF-rpl32 | IGS | 0.06798 | 45.9 | 543 | 1269 |
psaJ-rpl33 | IGS | 0.06666 | 27.8 | 382 | 501 |
ycf1 | CDS | 0.06567 | 173.4 | 2641 | 5585 |