Table 1 Basic features of the chloroplast genome of the 8 Calanthe group species
Species | Calanthe alpina | Calanthe brevicornu | Calanthe ecarinata | Calanthe nipponica | Calanthe taibaishanensis | Calanthe tricarinata | Phaius delavayi | Phaius flavus |
|---|---|---|---|---|---|---|---|---|
Accession no. | OL322023 | OL348396 | OL348397 | OL348398 | OL351366 | OL351367 | OL351368 | OL351369 |
Total Length (bp) | 156591 | 158384 | 158329 | 158714 | 157959 | 158343 | 150105 | 158556 |
LSC Size (bp) | 85489 | 87155 | 87293 | 87450 | 87129 | 87285 | 83364 | 87216 |
LSC GC% | 34.3 | 34.3 | 34.3 | 34.2 | 34.2 | 34.3 | 34.5 | 34.6 |
LSC Length (%) | 54.6 | 55.0 | 55.1 | 55.1 | 55.2 | 55.1 | 55.5 | 55.0 |
SSC Size (bp) | 18436 | 18531 | 18500 | 18404 | 18424 | 18522 | 16297 | 18586 |
SSC GC% | 29.5 | 29.6 | 29.7 | 29.7 | 29.6 | 29.7 | 29.4 | 29.8 |
SSC Length (%) | 13.1 | 11.7 | 11.7 | 11.6 | 11.7 | 12.0 | 11.0 | 11.7 |
IR Size (bp) | 26333 | 26349 | 26268 | 26430 | 26203 | 26268 | 25222 | 26377 |
IR GC% | 43.1 | 43.1 | 43.1 | 43.0 | 43.1 | 43.1 | 43.3 | 43.0 |
IR Length (%) | 16.2 | 16.6 | 16.6 | 16.7 | 16.6 | 16.4 | 16.8 | 16.6 |
PCGs region size (bp) | 78678 | 79083 | 79083 | 79275 | 79251 | 79083 | 73473 | 79353 |
tRNA size (bp) | 2870 | 2870 | 2870 | 2870 | 2870 | 2870 | 2870 | 2812 |
rRNA size (bp) | 9042 | 9042 | 9042 | 9042 | 9042 | 9042 | 9042 | 9042 |
GC content (%) | 36.7 | 36.7 | 36.7 | 36.6 | 36.6 | 36.7 | 36.9 | 36.8 |
No. of PCGs | 88 | 88 | 88 | 88 | 88 | 88 | 85 | 88 |
No. of tRNA | 38 | 38 | 38 | 38 | 38 | 38 | 38 | 37 |
No. of rRNA | 8(4) | 8(4) | 8(4) | 8(4) | 8(4) | 8(4) | 8(4) | 8(4) |
No. of genes | 134 | 134 | 134 | 134 | 134 | 134 | 131 | 133 |