Table 4 A summary of BLAST-search results showing significant alignments between intermediate wheatgrass candidate gene sequences and known genes in other species. In case of multiple alignments of an IWG gene to other genes in the NCBI database, the best alignment is shown per gene
IWG candidate gene | GWAS locus | Distance (kbp) from GWAS locus | Subject | % identity | E-value | ||
|---|---|---|---|---|---|---|---|
NCBI Gene ID | Species | Description | |||||
Thint.04G0153000.1.p | S04_76206640 | 207.21 | AEV91153.1 | Triticum carthlicum | R2R3-MYB protein | 92.7 | 0.0 |
Thint.04G0153000.2.p | S04_76206640 | 207.21 | AEV91153.1 | Triticum carthlicum | R2R3-MYB protein | 92.5 | 0.0 |
Thint.04G0153000.3.p | S04_76206640 | 207.21 | AEV91153.1 | Triticum carthlicum | R2R3-MYB protein | 92.6 | 0.0 |
Thint.04G0153000.5.p | S04_76206640 | 207.21 | AEV91153.1 | Triticum carthlicum | R2R3-MYB protein | 88.3 | 0.0 |
Thint.06G0531100.1.p | S06_485505428 | 0.51 | XP_044453837.1 | Triticum aestivum | anthocyanin 3′-O-beta-glucosyltransferase-like | 95.9 | 0.0 |
Thint.16G0006900.1.p | Chr16-Hb.2 | 38.77 | XP_020186660.1 | Aegilops tauschii subsp. strangulata | transcription factor MYB36 | 87.5 | 0.0 |
Thint.16G0007100.1.p | Chr16-Hb.2 | 38.77 | XP_020186660.1 | Aegilops tauschii subsp. strangulata | transcription factor MYB36 | 90.6 | 0.0 |