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Table 3 List of Differentially expressed unigenes with high/low expression in various tissues w.r.t leaf tissue

From: De novo transcriptome assembly and analysis of gene expression in different tissues of moth bean (Vigna aconitifolia) (Jacq.) Marechal

Tissue

Unigenes up-regulated with respect to leaf tissue

References

Unigenes down-regulated with respect to leaf tissue

References

Root

60S and 40S ribosomal proteins, WRKY transcription factors, MYB transcription factors, Putative disease resistance proteins

[25,26,27]

Pentatricopeptide repeat containing protein, Probable LRR receptor-like serine/threonine-protein kinase

[28]

Flower

Pentatricopeptide repeat containing protein, Subtilisin-like protease, WAT1-related protein, Peroxidases, Heavy metal-associated isoprenylated plant protein

[29]

ABC transporter

[30]

Pod (5DAA)

B3 domain-containing protein, ABC transporter family, Lipoxygenase, MYB, bHLH

[31,32,33]

ABC transporter, Zinc Finger protein, Phosphoglycerate kinase

[31, 34]

Early stages of seed development (10-15 DAA)

Beta-conglycinin, Vicilin-like proteins, bHLH, chaperone proteins

Heat stress transcription factors,

Receptor-like serine/threonine-protein kinase

[35, 36]

F-box proteins, WRKY Tfs, NAC Tfs, Pentatricopeptide repeat-containing protein, Protein NRT1/PTR FAMILY, CBL-interacting_serine/threonine-protein_kinase

[37, 38]

Late stages of seed development (20-25 DAA)

Pentatricopeptide repeat-containing protein, ABC transporters, Phospholipid-transporting_ATPase, Autophagy-related_protein, Zinc_finger domain containing_protein, F-box proteins, Beta conglycinin, chaperones, E3_ubiquitin-protein_ligase

[34, 39,40,41,42]

ABC transporters, AT-hook_motif_nuclear-localized_protein_1

bHLH Tfs, Zinc_finger_CCCH_domain-containing_protein, CBL-interacting_serine/threonine-protein_kinase, GATA Tfs, GDSL_esterase/lipase, Kinesin-like_protein, Nudix_hydrolase

U-box_domain-containing_protein

60S and 40S ribosomal proteins.

[43]