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Table 2 Genes annotated in 20 Swertia plastomes

From: Plastome structure, phylogenomics and evolution of plastid genes in Swertia (Gentianaceae) in the Qing-Tibetan Plateau

Gene products of the 20 Swertia plastomes

Photosystem I

psaA, B, C, I, J

Photosystem II

psbA, B, C, D, E, F, H, I, J, K, L, M, N, T, Z

Cytochrome b6_f

petA, B(1), D(1), G, L, N

ATP synthase

atpA, B, E, F(1), H, I

Rubisco

rbcL

NADH oxidoreductase

ndhA(1), B(1) (3), C, D, E, F, G, H, I, J, K

Large subunit ribosomal proteins

rpl2(1)(3), 14, 16(1), 20, 22, 23(3), 32, 33, 36

Small subunit ribosomal proteins

rps2, 3, 4, 7(3), 8, 11, 12 (1) (3), 14, 15, 16(1),18, 19(1) (3)

RNA polymerase

rpoA, B, C1(1), C2

Unknown function protein-coding gene

ycf1 (3), 2(3), 3(2), 4, 15 (3)

Other genes

accD, ccsA, cemA, clpP(2), infA, matK

rRNAs

rrn16(3), rrn23(3), rrn4.5(3), rrn5(3)

tRNAs

trnA-UGC(1)(3), trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnG-GCC, trnG-UCC(1), trnH-GUG, trnI-CAU(3), trnI-GAU(1) (3), trnK-UUU(1), trnL-CAA(3), trnL-UAG, trnL-UAA(1), trnM-CAU, trnN-GUU(3), trnP-UGG, trnQ-UUG, trnR-ACG(3), trnR-UCU, trnS-GCU, trnS-UGA, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC(3), trnV-UAC(1), trnW-CCA, trnY-GUA, trnfM-CAU

  1. (1) Gene containing a single intron
  2. (2) gene containing two introns
  3. (3) two gene copies in IRs