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Table 2 Positive selection sites were detected in the cp genome of the six Polystachya species

From: Comparative and phylogenetic analyses of six Kenya Polystachya (Orchidaceae) species based on the complete chloroplast genome sequences

M8

Region

Gene Name

Selected Sites

Pr (ω > 1)

Region

Gene Name

Selected Sites

Pr (ω > 1)

LSC

atpH

1774G

0.955*

LSC

rps3

13885I

0.953*

SSC

ccsA

17025G

0.966*

SSC/IRA

ycf1

18,225 L

0.957*

  

17026C

0.971*

IR

ycf2

15032C

0.952*

LSC

clpP

11,668 L

0.960*

  

15064A

0.951*

LSC

matK

441 T

0.959*

  

15339E

0.954*

  

469Q

0.957*

  

15823S

0.957*

LSC

psbA

287R

0.961*

  

15839Q

0.956*

LSC

rbcL

9003I

0.958*

  

15,948 L

0.957*

LSC

rpl14

13618D

0.952*

  

16,192 L

0.951*

LSC

rpl16

13651F

0.950*

  

16216I

0.992**

  

13739S

0.951*

  

16,224 K

0.954*

LSC

rpoA

13093Y

0.960*

  

16356R

0.958*

LSC

rpoC2

2429 L

0.953*

  

16395R

0.960*

  

2512 M

0.957*

  

16402R

0.952*

  

2529E

0.957*

  

16424Y

0.953*

  

3003I

0.951*

  

16634I

0.950*

  

3376Y

0.959*

    
  1. * p > 95%; ** p > 99%
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BMC Plant Biology

ISSN: 1471-2229

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