Assembly and comparative analysis of the first complete mitochondrial genome of Acer truncatum Bunge: a woody oil-tree species producing nervonic acid

Table 2 Gene profile and organization of the A. truncatum mitogenome

Group of genes	Gene name	Length	Start codon	Stop codon	Amino acids
ATP synthase	atp1	1530	ATG	TGA	509
	atp4	597	ATG	TAG	198
	atp6	774	ACG	TAA	257
	atp8	480	ATG	TAA	159
	atp9	225	ATG	TGA	74
NADH dehydrogenase	nad1^a	978	ACG	TAA	325
	nad2^a	1467	ATG	TAA	488
	nad3	357	ATG	TAA	118
	nad4^a	1488	ATG	TGA	495
	nad4L	303	ACT	TAA	100
	nad5	2004	ATG	TAA	667
	nad6	618	ATG	TAA	205
	nad7^a	1185	ATG	TAG	394
	nad9	573	ATG	TAA	190
Cytochrome c biogenesis	ccmB	621	ATG	TGA	206
	ccmC	753	ATG	TGA	250
	ccmFc^a	1365	ATG	TAG	454
	ccmFn	1734	ATG	TGA	577
Maturases	matR	1962	ATG	TAG	653
Ubichinol cytochrome c reductase	cob	1182	ATG	TGA	393
Cytochrome c oxidase	cox1(2)	1584	ATG	TAA	527
	cox2	795	ATG	TGA	264
	cox3	798	ATG	TGA	265
Transport membrane protein	mttB	792	ATA	TAG	264
Ribosomal proteins (LSU)	rpl5	555	ATG	TAA	184
Ribosomal proteins (LSU)	rpl16	516	ATG	TAA	171
Ribosomal proteins (SSU)	rps3^a	1686	ATG	TAA	561
	rps4	1077	ATG	TAA	358
	rps10^a	330	ATG	TAA	109
	rps12	378	ATG	TGA	125
	rps13	294	ATG	TGA	97
	rps14	255	ATG	TGA	84
Succinate dehydrogenase	sdh3	327	ATG	TGA	108
Succinate dehydrogenase	sdh4	480	ATG	TAA	159
Transfer RNAs	trnY-GTA	83	_	_	_
	trnN-GTT^b(2)	72	_	_	_
	trnC-GCA	71	_	_	_
	trnM-CAT(4)	73/74/74/77	_	_	_
	trnK-TTT	73	_	_	_
	trnS-GCT	88	_	_	_
	trnF-GAA	74	_	_	_
	trnP-TGG^b(2)	74/75	_	_	_
	trnE-TTC	72	_	_	_
	trnW-CCA^b(2)	73/74	_	_	_
	trnS-TGA	87	_	_	_
	trnD-GTC^b	74	_	_	_
	trnQ-TTG	72	_	_	_
	trnG-GCC	72	_	_	_
	trnH-GTG^b(2)	74/74	_	_	_
	trnH-ATG	76	_	_	_
Ribosomal RNAs	rrn5(2)	119/120	_	_	_
	rrn18	1939	_	_	_
	rrn26	3102	_	_	_

Note: Numbers after gene names are the number of copies. The superscripts a and b indicate genes containing introns and chloroplast-derived genes, respectively

ISSN: 1471-2229