Table 2 SNP loci significantly associated with C. sojina resistance traits by GWAS
Methods | Marker | Chromosome | Position | Marker F | p value | Add F | Add p | Dom F | Dom p |
|---|---|---|---|---|---|---|---|---|---|
GLM | Affx-89,062,122 | 5 | 34,658,974 | 11.79327 | 1.33E-05 | 0.21198 | 0.64566 | 23.35405 | 2.46E-06 |
Affx-89,220,750 | 5 | 34,687,389 | 9.78979 | 8.31E-05 | 0.04618 | 0.83004 | 19.5297 | 1.53E-05 | |
Affx-89,210,591 | 20 | 40,270,311 | 9.77378 | 8.43E-05 | 2.56054 | 0.11093 | 16.81175 | 5.73E-05 | |
Affx-89,163,218 | 20 | 40,262,553 | 9.62294 | 9.71E-05 | 2.82916 | 0.09392 | 16.22938 | 7.64E-05 | |
MLM(K) | Affx-89,062,122 | 5 | 34,658,974 | 10.83494 | 3.19E-05 | 0.11133 | 0.73894 | 21.4606 | 6.05E-06 |