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Table 1 Differential expressed TFs of induced (CW) versus non-induced (CNW) thalli at 6 h. Log2FC > 1: upregulated, Log2FC<-1: down-regulated. The homologs of the TFs of A. thaliana and C. reinhardtii are listed in the “AtGID” and “CrID” columns respectively. Gene function annotations are summarized from TAIR or Phytozome databases, respectively

From: Transcriptional dynamics of gametogenesis in the green seaweed Ulva mutabilis identifies an RWP-RK transcription factor linked to reproduction

GeneID

AtGID

CrID

Family/Domain

Log2FC

Gene function annotation

UMSL012_0085

AT4G18770

CR03G00530

MYB

2.55

MYB98: expressed in the synergid cells, affect the female gametophytea

UMSL129_0009

N/A

N/A

MYB

1.85

N/A

UMSL039_0026

AT2G43770

CR12G01870

DEAD

2.21

FAP 52: flagellar associated proteinb

UMSL054_0061

N/A

N/A

DEAD

2.81

N/A

UMSL003_0532

AT5G58080

CR02G02460

GARP_G2-like

1.08

ARR18: member of response regulatora

UMSL103_0003

AT5G43990

N/A

SET

1.53

SUVR2: regulation of eukaryotic gene expression and chromatin structurea

UMSL008_0028

AT5G57390

CR01G02250

AP2/EREBP

1.49

AIL5: involved in germination and seedling growtha

UMSL032_0028

AT2G01830

CR06G00550

DEAD

1.08

AHK4: cytokinin-binding receptor that transduces cytokinin signalsa

UMSL057_0048

AT5G53040

CR03G09530

RWP-RK

1.62

GR: promotes zygote elongation and basal cell fatesa

UMSL024_0043

AT3G28730

CR12G13130

HMG

4.77

ATHMG: binds to the promoter of a repressor of flowering: FLCa

UMSL033_0026

AT2G25170

CR03G03890

SWI/SNF_SNF2

1.51

CHD3: involved in post-germination repression of embryonic developmenta

UMSL003_0659

AT3G27730

CR10G06300

DEAD

1.52

MER3: DNA helicase required for interference-sensitive meiotic crossovera

UMSL151_0016

AT3G16770

CR16G05640

AP2

−1.32

ATEBP: ethylene response factora

UMSL085_0029

AT2G17520

CR08G03590

zf-CCCH

−1.27

ATIRE1–2: involved in the regulation of the ER stress responsive genesa

UMSL051_0112

AT5G41370

CR06G12570

DEAD

−1.14

ATXPB1: encodes a DNA repair proteina

UMSL003_0378

AT1G19270

CR10G01560

DEAD

−1.11

DA1: controls the initiation of axillary meristemsa

UMSL053_0033

AT3G58680

CR02G09000

MBF1

−1.03

FAP280: flagellar associated proteinb

UMSL011_0269

AT1G01040

N/A

DEAD

−1.03

ABNORMAL SUSPENSOR 1: encodes a Dicer homologa

  1. a Access from TAIR database (https://www.arabidopsis.org/)
  2. b Access from Phytozome database (https://phytozome.jgi.doe.gov/pz/portal.html)