Table 2 Novel miRNAs identified in the fertile and sterile lines of Brassica napus by high-throughput sequencing

bna-novel_1-3p

CUUCCUCCUAACACCAAUUGAUU

23

67

chrA09:27889716..27889818

102

−34.6

bna-novel_1-5p

AUCAAUUGGUUUUAGGUUAAGAAGCC

26

124

bna-novel_2-3p

UGGCAUUGGUAGUAAUGAGUGU

22

190

chrC04:42905032..42905108

76

−26.9

bna-novel_2-5p

ACUCAUUACCAUCAGAGCCAC

21

7

bna-novel_3-3p

UCAAUGUUGGCUCAAUUAUGU

21

120

chrC02:22515980..22516065

85

−29.5

bna-novel_3-5p

UCAUUGAGUGCAGCGUUGAUGU

22

12

bna-novel_4-3p

AUUAUCGACACUGAUCUCAUC

21

106

chrC08:2975781..2975915

134

−80.8

bna-novel_4-5p

UAAGGUCACUGUGGUAAUCC

20

52

bna-novel_5-3p

UCAAUGUUGGCUCAAUUAUG

20

49

chrC09:40959623..40959707

84

−31.6

bna-novel_5-5p

UCAUUGAGUGCAGCGUUGAUGU

22

12

bna-novel_6-5p

AAGGACUCUAAUCAGAAAUAUUGG

24

143

chrC06:35249139..35249190

51

−9.9

bna-novel_6-3p

AAUGGUCUUAUCUGGAAUCCUUAA

24

11

bna-novel_7-5p

UGCCUGGCUCCCUGUAUACCA

21

83

chrA08:8293061..8293144

83

−32.4

bna-novel_7-3p

GUGUAUAGAGUAGUCAAGCAUG

22

2

bna-novel_8-5p

AUCUCUAAUGUAUAACUCCAUUUU

24

24

chrA03:20065617..20065865

248

−95.7

bna-novel_8-3p

AAUGGAGUAGAUAUGGAGAUGCCC

24

1

bna-novel_9-3p

UUGGACUGAAGGGAACUCCCU

21

1527

chrA09:14645700..14645869

169

−64.4

bna-novel_9-5p

AGAGUUUCCUUAAGUCCAUUC

21

17

bna-novel_10-5p

UAAGAUCUUUGUACUUUCGGG

21

67

chrA10:15442817..15442916

99

−39.8

bna-novel_10-3p

CGAAAGUACAAAGAUCUGAAA

21

3

bna-novel_11-5p

AACAGUUGGAUUGGCUCUACGUGG

24

27

chrA09_random:3088720..3089020

300

−65.5

bna-novel_11-3p

ACGAUGGAGGACAAAACUGAUGCA

24

2

bna-novel_12-5p

UUUUCAGCAAUCUCUUUUCCAUU

23

44

chrA05_random:416209..416319

110

−29.5

bna-novel_12-3p

AUGGGAAAGAUUGUUGAUCAGA

22

6

bna-novel_13-5p

UAAAGUAGAGCUCGGUGACGG

21

1163

chrC03:20992442..20992727

285

−240.3

bna-novel_13-3p

GUCACCGAGCUCUACUUUAUA

21

1058

bna-novel_14-5p

UCGCUUCUGUUGAAUAAUUUUGAC

24

22

chrC04:45707769..45708016

247

− 148

bna-novel_14-3p

CAAAAUUAUUCAACAGAAGCGAAU

24

23

bna-novel_15-5p

AUAUGAGGGUACAAUAGGAAG

21

137

chrAnn_random:33598332..33598540

208

−139.1

bna-novel_15-3p

UAUUGUACCCUCAUAUAUAGC

21

89

bna-novel_16-3p

CUAAGAGAUCUGUAAUAAACAUGC

24

30

chrC04:7124159..7124378

219

−117.5

bna-novel_16-5p

AUGUUUAUUGUAGGUCUUUUAGGUU

25

7

bna-novel_17-5p

ACGAACACUGAGUAAUAUCUG

21

15

chrC01_random:3928762..3929012

250

−164.8

bna-novel_17-3p

GAUAUUACUCAGUGUUCGUUG

21

13

bna-novel_18-3p

ACACUGCAGUGCACUGUACAUUGC

24

17

chrCnn_random:79954335..79954585

250

−113.8

bna-novel_18-5p

GUUGUACAUUGUACACAGCGGUGUAC

26

3

bna-novel_19-5p

UUGCAAACUGAAUUAUGAGUC

21

20

chrA09:30966144..30966235

91

−45.4

bna-novel_19-3p

CUCAUAAUUCAGUUUGCAAUC

21

20

bna-novel_20-5p

AAGAUACGGUCUCUUAACUUUUAG

24

259

chrC04_random:3818028..3818149

121

−67.8

bna-novel_20-3p

GUUAAUAGACCGUAUCUUAUA

21

13

bna-novel_21-5p

AACGAUCUUGUUUGGUUUUGAAGA

24

18

chrA05:21620032..21620188

156

−82.1

bna-novel_21-3p

UUCAAAACCAUACAAGAUCGUUUU

24

24

bna-novel_22-3p

GAUCAUGUUCGUAGUUUCACC

21

445

chrCnn_random:35712007..35712108

101

−47.3

bna-novel_22-5p

UGAAGCUGCCAGCAUGAUCU

20

3

bna-novel_23-3p

UUCUUGUGCGUUUAUAGGUAG

21

55

chrA06:23040126..23040236

110

−52.8

bna-novel_23-5p

ACCUCUAAAACACACAAGAAGA

22

3

bna-novel_24-5p

UGUUUCGCUGUUACUCAUGC

20

40

chrC02:8973302..8973545

243

−93.1

bna-novel_24-3p

AUGAGUAACAGCGAAACAAA

20

26

bna-novel_25-3p

AAACUGUGUGAACUCUCCAUGGAG

24

389

chrC02_random:2214651..2214881

230

−73.8

bna-novel_25-5p

CCAUAAAAAGGGUUCACAAAGUAUUU

26

1

bna-novel_26-3p

UUGAUACAUGUAGCUCUUUG

20

2089

chrA03:669098..669269

171

−83.8

bna-novel_26-5p

AAGUGCUACCGGUAUCCACGUG

22

840

bna-novel_27-5p

UUAAUCGUUUUGUGACUCUU

20

244

chrA07:19146929..19147018

89

−34.7

bna-novel_27-3p

UAGUUACAAAACGAUUAGUGC

21

24

bna-novel_28-3p

AUCAACGUUGGCUCAAUUAUG

21

453

chrA10_random:1861693..1861781

88

−33.2

bna-novel_28-5p

UCAUUGAGUGCAGCGUUGAUGU

22

12

bna-novel_29-3p

UCUUGUUACUGAGCUCGACG

20

308

chrA02:7209993..7210285

292

−99.9

bna-novel_29-5p

UUCAGCUGGGUACGAGCCACC

21

710

bna-novel_30-5p

AUCUGCAUCGAGUGAACUCUAUGG

24

426

chrCnn_random:65177977..65178226

249

−72.9

bna-novel_30-3p

AUGGAAUUCACUGAUGCAGAUGCU

24

7

bna-novel_31-5p

UUCUUGUGGUUGUAGAGUCUUG

22

367

chrA06:4069612..4069740

128

−56.1

bna-novel_31-3p

AGACUCUACAACAUCAGAAAC

21

47

bna-novel_32-5p

CGGAUUUUAGCUGCGUAGCUA

21

322

chrAnn_random:44030328..44030409

81

−42.5

bna-novel_32-3p

GGCUACGCUGCUGAAUCCGC

20

2

bna-novel_33-3p

UUGUAGAAUUUUGGGAAGGGC

21

289

chrC05_random:138762..138826

64

−32.6

bna-novel_33-5p

CCUUCCCAAAAUUCUACAAUU

21

39

bna-novel_34-5p

ACUUUGAAACUUUGAUCUAGA

21

5292

chrC06:5179422..5179524

102

−42.4

bna-novel_34-3p

UAGAUCAAAGCUUUAAUGU

19

20

bna-novel_35-3p

UUUUCGAUCUGUAAAUUU

18

4

chrA03:11978303..11978381

78

−30.5

bna-novel_35-5p

CAUUUACAGAUCGAAGACAUU

21

3