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Table 3 Summary of QTL for tuber shape (TS) and specific gravity (SG)

From: Linkage and QTL mapping for tuber shape and specific gravity in a tetraploid mapping population of potato representing the russet market class

Labels of QTL

Traits a

chr b

LOP score

Heritability of mapped QTL (h2QTL)

QTL Position (Support Interval) [Unit: cM] c

Most closely associated

SNPs d

TS_QTL_ch04_a

TS_clo

4

3.11

0.09

6.78 (0.00–70.48)

c2_54790

TS_QTL_ch04_b

TS_clo_ID

4

3.27

0.11

6.78 (0.00–6.78)

c2_54790

TS_QTL_ch04_c

TS_clo_ID_2010

4

3.54

0.12

6.78 (0.00–40.75)

c2_54790

TS_QTL_ch07_a

TS_clo_NC_2011

7

3.25

0.11

47.66

(31.23–85.71)

c2_26012

TS_QTL_ch10_a

TS_clo

10

7.10

0.28

86.75

(79.09–88.09)

c1_15594

TS_QTL_ch10_b

TS_clo_ID

10

4.50

0.18

86.75

(79.09–95.37)

c1_15594

TS_QTL_ch10_c

TS_clo_NC

10

9.08

0.36

79.09

(79.09–86.75)

c1_11535

TS_QTL_ch10_d

TS_clo_2010

10

7.70

0.32

86.75

(79.09–93.38)

c1_15594

TS_QTL_ch10_e

TS_clo_2011

10

7.64

0.34

86.75

(79.09–93.38)

c1_15594

TS_QTL_ch10_f

TS_clo_ID_2010

10

4.31

0.19

86.75

(74.94–95.37)

c1_15594

TS_QTL_ch10_g

TS_clo_ID_2011

10

7.07

0.31

86.75

(79.09–93.38)

c1_15594

TS_QTL_ch10_h

TS_clo_NC_2010

10

7.23

0.31

86.75

(79.09–93.38)

c1_15594

TS_QTL_ch10_i

TS_clo_NC_2011

10

8.24

0.33

86.75

(79.09–88.09)

c1_15594

SG_QTL_ch01_a

SG_clo

1

3.19

0.12

122.30

(96.30–149.24)

c1_1847

SG_QTL_ch01_b

SG_clo_NC

1

3.88

0.19

141.26

(136.13–149.24)

c2_49905

SG_QTL_ch01_c

SG_clo_ID_2011

1

3.15

0.13

121.23

(79.47–149.24)

c2_7053

SG_QTL_ch01_d

SG_clo_NC_2011

1

3.32

0.16

141.26

(136.13–149.24)

c2_49905

SG_QTL_ch01_e

SG_clo_MN_2011

1

3.27

0.14

122.30

(91.69–149.24)

c1_1847

SG_QTL_ch05_a

SG_clo

5

3.94

0.21

51.63

(43.55–54.04)

c2_3452

SG_QTL_ch05_b

SG_clo_ID

5

3.61

0.18

51.63

(33.00–54.04)

c2_3452

SG_QTL_ch05_c

SG_clo_MN

5

3.24

0.15

43.55

(32.00–54.04)

c2_42406

SG_QTL_ch05_d

SG_clo_ID_2010

5

3.05

0.17

51.63

(33.00–54.04)

c2_3452

SG_QTL_ch05_e

SG_clo_ID_2011

5

3.47

0.18

51.63

(43.55–54.04)

c2_3452

SG_QTL_ch05_f

SG_clo_MN_2011

5

3.92

0.20

51.63

(33.00–54.04)

c2_3452

  1. aThe same BLUP datasets described in Supplementary Table 3
  2. bChromosome numbers
  3. cThe bold figures indicate the locations of the mapped QTL peak and numbers in the parentheses showing ranges of their support intervals; The unit is centiMorgans (cM)
  4. dThe most adjacent SNPs to each QTL peak were presented in this column; “solcap_snp_” was omitted at the beginning of all the SNP marker names
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BMC Plant Biology

ISSN: 1471-2229

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