Table 1 Summary of the sequence data from RNA sequencing
Sample | Raw Reads | Clean Reads | Virus Reads and unblasted Reads | Effective Reads | Q20(%) | Mapping Ratio(%) | Multiple Mapping Ratio(%) | Mapped Reads |
|---|---|---|---|---|---|---|---|---|
Flower-CK-1 | 43556646 | 43470330 | 19475428 | 23994902 | 98.24 | 77.33 | 6.12 | 20020426 |
Flower-CK-2 | 45390350 | 45340972 | 21579690 | 23761282 | 98.25 | 77.18 | 6.08 | 19785119 |
Flower-CK-3 | 47512154 | 47472814 | 28923258 | 18549556 | 98.24 | 72.73 | 5.78 | 14561962 |
Flower-SP-1 | 44441130 | 44392748 | 26520674 | 17872074 | 98.18 | 71.86 | 5.83 | 13884621 |
Flower-SP-2 | 41878816 | 41826132 | 23494042 | 18332090 | 98.17 | 72.43 | 5.84 | 14347441 |
Flower-SP-3 | 45985172 | 45045678 | 15383196 | 30562482 | 98.24 | 80.52 | 6.57 | 26614315 |