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Table 1 Detailed information of all 143 VvRCHCs identified in grapevine genome

From: Identification of C3H2C3-type RING E3 ubiquitin ligase in grapevine and characterization of drought resistance function of VyRCHC114

Gene name Sequence ID Chromosome Localization Protein Length (aa)a Molecular Weight (kDa)b pIc
VvRCHC1 VIT_01s0011g00090.t01 Chr1 116646~118695 167 18.65 4.9
VvRCHC2 VIT_01s0011g02350.t01 Chr1 2131084~2131795 174 20.07 8.32
VvRCHC3 VIT_01s0011g02360.t01 Chr1 2136955~2137455 166 18.87 7.05
VvRCHC4 VIT_01s0011g02380.t01 Chr1 2145560~2145874 104 12.09 5.06
VvRCHC5 VIT_01s0011g02390.t01 Chr1 2147401~2148062 172 19.91 5.88
VvRCHC6 VIT_01s0011g02410.t01 Chr1 2170994~2171522 173 19.97 7.57
VvRCHC7 VIT_01s0011g02420.t01 Chr1 2187275~2187979 173 19.70 6.64
VvRCHC8 VIT_01s0011g04080.t01 Chr1 3727811~3730410 351 38.67 9.46
VvRCHC9 VIT_01s0026g00300.t01 Chr1 8988327~8989738 420 45.76 6.01
VvRCHC10 VIT_01s0026g02540.t01 Chr1 12168327~12169146 233 25.68 4.87
VvRCHC11 VIT_01s0150g00260.t01 Chr1 22675690~22682439 232 25.76 5.25
VvRCHC12 VIT_02s0025g00030.t01 Chr2 209926~211750 227 24.95 4.4
VvRCHC13 VIT_02s0025g00140.t01 Chr2 291046~291759 168 19.26 4.66
VvRCHC14 VIT_02s0025g01430.t01 Chr2 1379376~1383064 386 42.37 6.09
VvRCHC15 VIT_02s0025g03070.t01 Chr2 2622704~2623554 187 20.18 5.72
VvRCHC16 VIT_02s0025g04150.t01 Chr2 3670653~3678402 384 42.55 5.23
VvRCHC17 VIT_02s0012g01440.t01 Chr2 7633461~7635180 292 33.14 4.96
VvRCHC18 VIT_02s0087g00420.t01 Chr2 17748161~17758528 561 62.51 8.15
VvRCHC19 VIT_03s0063g00160.t01 Chr3 3768331~3782384 734 78.34 6.06
VvRCHC20 VIT_03s0063g01890.t01 Chr3 5217040~5219107 396 45.16 9.95
VvRCHC21 VIT_03s0091g00480.t01 Chr3 6851584~6855075 278 31.25 8.63
VvRCHC22 VIT_03s0088g00930.t01 Chr3 9146189~9147403 393 42.59 6.53
VvRCHC23 VIT_03s0088g01090.t01 Chr3 9340156~9341562 457 49.83 6.71
VvRCHC24 VIT_03s0097g00680.t01 Chr3 11239802~11241097 421 45.90 6.41
VvRCHC25 VIT_03s0017g00670.t01 Chr3 15529867~15532640 427 47.50 5.43
VvRCHC26 VIT_04s0008g02290.t01 Chr4 1889354~1891807 293 32.81 5.02
VvRCHC27 VIT_04s0008g02390.t01 Chr4 1970602~1975816 550 60.01 8.19
VvRCHC28 VIT_04s0008g04280.t01 Chr4 3660980~3669030 401 44.19 7.88
VvRCHC29 VIT_04s0008g04480.t01 Chr4 3852636~3861794 315 36.68 7.19
VvRCHC30 VIT_04s0023g03460.t01 Chr4 20022053~20022628 166 18.05 6.97
VvRCHC31 VIT_05s0077g01970.t01 Chr5 1538565~1539938 317 34.99 8.34
VvRCHC32 VIT_05s0020g01800.t01 Chr5 3519576~3525991 267 31.02 6.58
VvRCHC33 VIT_05s0020g04000.t01 Chr5 5689012~5690195 164 18.50 9.8
VvRCHC34 VIT_05s0049g00480.t01 Chr5 7527982~7529676 390 43.91 8.25
VvRCHC35 VIT_05s0051g00730.t01 Chr5 11700888~11720325 190 21.26 6.14
VvRCHC36 VIT_06s0004g00120.t01 Chr6 257501~259353 368 40.90 4.82
VvRCHC37 VIT_06s0004g01930.t01 Chr6 2373671~2382922 252 28.69 5.47
VvRCHC38 VIT_06s0004g05080.t01 Chr6 6014664~6018771 284 31.83 5.73
VvRCHC39 VIT_06s0004g05090.t01 Chr6 6020330~6022057 386 42.57 8.87
VvRCHC40 VIT_06s0004g06930.t01 Chr6 7643002~7643805 267 29.33 5.76
VvRCHC41 VIT_06s0004g08080.t01 Chr6 8843648~8845413 263 29.12 7.89
VvRCHC42 VIT_06s0009g02350.t01 Chr6 14742953~14747814 336 36.99 6.3
VvRCHC43 VIT_06s0009g03540.t01 Chr6 16816009~16816598 162 18.43 5.32
VvRCHC44 VIT_06s0061g00710.t01 Chr6 18243947~18247168 289 33.05 6.45
VvRCHC45 VIT_07s0104g01370.t01 Chr7 2388448~2393119 268 31.42 6.1
VvRCHC46 VIT_07s0005g00710.t01 Chr7 3351600~3352612 263 28.82 6.7
VvRCHC47 VIT_07s0005g03120.t01 Chr7 5941893~5942809 264 29.97 6.11
VvRCHC48 VIT_07s0191g00230.t01 Chr7 15035569~15037412 372 41.30 5.98
VvRCHC49 VIT_07s0031g00370.t01 Chr7 16601231~16602190 145 16.55 4.66
VvRCHC50 VIT_07s0031g00380.t01 Chr7 16612579~16612919 70 7.83 4.93
VvRCHC51 VIT_07s0031g00390.t01 Chr7 16615612~16618016 244 26.72 4.48
VvRCHC52 VIT_07s0031g00400.t01 Chr7 16623222~16623766 102 11.17 4.45
VvRCHC53 VIT_07s0031g00440.t01 Chr7 16651426~16652337 220 24.25 4.17
VvRCHC54 VIT_07s0031g01270.t01 Chr7 17354201~17354899 159 18.65 5.95
VvRCHC55 VIT_07s0031g02250.t01 Chr7 18383520~18384391 182 19.29 8.32
VvRCHC56 VIT_08s0056g00320.t01 Chr8 453669~461038 590 66.55 4.63
VvRCHC57 VIT_08s0058g01270.t01 Chr8 10736680~10737686 195 21.19 6.91
VvRCHC58 VIT_08s0040g00310.t01 Chr8 11231370~11255659 385 43.10 6.81
VvRCHC59 VIT_08s0040g00590.t01 Chr8 11540810~11542129 314 34.85 7.7
VvRCHC60 VIT_08s0040g02160.t01 Chr8 13268900~13272455 546 60.42 6.26
VvRCHC61 VIT_08s0040g02950.t01 Chr8 13968494~13969465 285 31.37 7.6
VvRCHC62 VIT_08s0007g00150.t01 Chr8 14536064~14536944 178 19.87 5.78
VvRCHC63 VIT_08s0007g00720.t01 Chr8 14916670~14922764 516 57.58 8.62
VvRCHC64 VIT_08s0007g04790.t01 Chr8 18767623~18771322 289 33.33 6.11
VvRCHC65 VIT_09s0002g00220.t01 Chr9 197510~198755 304 33.08 5.68
VvRCHC66 VIT_09s0002g01500.t01 Chr9 1282580~1283385 140 15.83 4.92
VvRCHC67 VIT_09s0002g05120.t01 Chr9 4813804~4820015 442 48.81 6.5
VvRCHC68 VIT_09s0002g05130.t01 Chr9 4821806~4822755 208 22.69 5.82
VvRCHC69 VIT_09s0002g05140.t01 Chr9 4836806~4838491 309 33.91 5.16
VvRCHC70 VIT_10s0003g00850.t01 Chr10 2100756~2101775 218 23.74 5.19
VvRCHC71 VIT_10s0042g00580.t01 Chr10 13534118~13544150 308 33.77 3.88
VvRCHC72 VIT_11s0016g00070.t01 Chr11 37814~38430 136 15.38 8.71
VvRCHC73 VIT_11s0016g01430.t01 Chr11 1146136~1146786 178 20.16 6.38
VvRCHC74 VIT_11s0016g03190.t01 Chr11 2563204~2564128 168 17.85 6.39
VvRCHC75 VIT_11s0016g03420.t01 Chr11 2778391~2787457 469 53.37 7.24
VvRCHC76 VIT_11s0016g04450.t01 Chr11 3757897~3762458 407 44.19 5.53
VvRCHC77 VIT_11s0118g00640.t01 Chr11 6397984~6398548 119 13.64 4.55
VvRCHC78 VIT_11s0118g00760.t01 Chr11 6533770~6542103 542 58.69 5.35
VvRCHC79 VIT_11s0118g00780.t01 Chr11 6552717~6553829 193 21.59 9.37
VvRCHC80 VIT_11s0037g01400.t01 Chr11 10944676~10946544 543 59.50 6.26
VvRCHC81 VIT_11s0065g01210.t01 Chr11 15329284~15329979 167 18.78 8.82
VvRCHC82 VIT_11s0052g00360.t01 Chr11 17683751~17684146 131 14.89 4.83
VvRCHC83 VIT_11s0052g00530.t01 Chr11 17936593~17938168 457 51.48 9.56
VvRCHC84 VIT_12s0028g01220.t01 Chr12 1843979~1851603 219 24.66 4.88
VvRCHC85 VIT_12s0028g01560.t01 Chr12 2265770~2266849 190 22.29 8.77
VvRCHC86 VIT_12s0028g01570.t01 Chr12 2274491~2275931 224 26.20 7.62
VvRCHC87 VIT_12s0028g01580.t01 Chr12 2278915~2280538 339 38.82 6.63
VvRCHC88 VIT_12s0028g02530.t01 Chr12 3292336~3293351 254 27.54 5.72
VvRCHC89 VIT_12s0028g03410.t01 Chr12 4186053~4209365 570 65.51 8.3
VvRCHC90 VIT_12s0057g01330.t01 Chr12 10069923~10070893 202 22.49 5.85
VvRCHC91 VIT_12s0034g01390.t01 Chr12 17398801~17400234 451 52.26 8.22
VvRCHC92 VIT_12s0034g01400.t01 Chr12 17414404~17415189 261 29.71 6.86
VvRCHC93 VIT_13s0067g02880.t01 Chr13 1558971~1559978 197 21.06 6.73
VvRCHC94 VIT_13s0019g00990.t01 Chr13 2740552~2741055 167 18.34 5.94
VvRCHC95 VIT_13s0019g01000.t01 Chr13 2742040~2742492 150 16.69 4.64
VvRCHC96 VIT_13s0019g01020.t01 Chr13 2749369~2749848 159 17.49 6.77
VvRCHC97 VIT_13s0019g01960.t01 Chr13 3261036~3269087 275 30.08 6.23
VvRCHC98 VIT_13s0019g01980.t01 Chr13 3282264~3294013 763 83.58 7.79
VvRCHC99 VIT_13s0019g04100.t01 Chr13 5376959~5389168 565 63.18 6.42
VvRCHC100 VIT_13s0074g00370.t01 Chr13 7973641~7981844 209 23.54 5.82
VvRCHC101 VIT_13s0084g00140.t01 Chr13 18797445~18798197 191 20.08 7.57
VvRCHC102 VIT_13s0064g01030.t01 Chr13 22907333~22911899 247 28.32 5.45
VvRCHC103 VIT_13s0156g00140.t01 Chr13 23884150~23887948 312 33.41 4.7
VvRCHC104 VIT_14s0060g00290.t01 Chr14 278763~286055 137 16.21 7.58
VvRCHC105 VIT_14s0128g00120.t01 Chr14 2814506~2816124 420 45.76 9.5
VvRCHC106 VIT_14s0083g00710.t01 Chr14 22855118~22856402 391 43.71 3.97
VvRCHC107 VIT_14s0083g01000.t01 Chr14 23286167~23293023 225 25.54 4.94
VvRCHC108 VIT_14s0066g01610.t01 Chr14 27970245~27971983 386 42.89 6.16
VvRCHC109 VIT_15s0024g01990.t01 Chr15 4356512~4356925 137 14.73 5.93
VvRCHC110 VIT_15s0045g00330.t01 Chr15 5087898~5088931 338 37.58 5.55
VvRCHC111 VIT_15s0021g00890.t01 Chr15 10761195~10763021 203 22.12 4.78
VvRCHC112 VIT_15s0048g01840.t01 Chr15 15988642~15991207 201 22.58 5.51
VvRCHC113 VIT_15s0048g02030.t01 Chr15 16165343~16170176 382 43.09 5.65
VvRCHC114 VIT_15s0046g00930.t01 Chr15 17988199~17990082 372 40.71 4.78
VvRCHC115 VIT_15s0046g01820.t01 Chr15 18650570~18653922 184 20.52 4.66
VvRCHC116 VIT_15s0046g01880.t01 Chr15 18703282~18703952 167 19.10 4.83
VvRCHC117 VIT_15s0046g02070.t01 Chr15 18873629~18874670 197 21.47 6.49
VvRCHC118 VIT_15s0046g03770.t01 Chr15 20300677~20302386 81 9.47 6.47
VvRCHC119 VIT_16s0039g02200.t01 Chr16 2285896~2293114 502 56.87 6.57
VvRCHC120 VIT_16s0022g00290.t01 Chr16 11163433~11164324 76 8.64 7.57
VvRCHC121 VIT_16s0022g00600.t01 Chr16 11897657~11912487 587 65.27 6.85
VvRCHC122 VIT_16s0098g00250.t01 Chr16 20642143~20644650 367 40.74 5.45
VvRCHC123 VIT_17s0000g03210.t01 Chr17 3094227~3100434 371 40.80 8.7
VvRCHC124 VIT_17s0000g04730.t01 Chr17 5126163~5127854 439 49.33 4.13
VvRCHC125 VIT_17s0000g06460.t01 Chr17 7045832~7050297 217 49.33 4.13
VvRCHC126 VIT_17s0053g00320.t01 Chr17 14868182~14869346 369 38.60 4.43
VvRCHC127 VIT_18s0122g00870.t01 Chr18 626783~627577 184 19.24 8.28
VvRCHC128 VIT_18s0001g01050.t01 Chr18 1721216~1721614 132 14.79 5.02
VvRCHC129 VIT_18s0001g01060.t01 Chr18 1727361~1728295 114 12.33 4.84
VvRCHC130 VIT_18s0001g02280.t01 Chr18 2629486~2630245 207 23.33 3.99
VvRCHC131 VIT_18s0001g03270.t01 Chr18 3233803~3234804 333 38.18 7.13
VvRCHC132 VIT_18s0001g06640.t01 Chr18 5000284~5003505 405 44.98 5.15
VvRCHC133 VIT_18s0001g06670.t01 Chr18 5020431~5021751 398 44.25 9.09
VvRCHC134 VIT_18s0001g10260.t01 Chr18 8598100~8604904 734 78.55 5.98
VvRCHC135 VIT_18s0001g14530.t01 Chr18 12533609~12536412 334 37.20 4.34
VvRCHC136 VIT_18s0075g00220.t01 Chr18 21471547~21496753 444 47.91 8.92
VvRCHC137 VIT_18s0089g00860.t01 Chr18 28686085~28689586 221 24.97 5.05
VvRCHC138 VIT_19s0014g01850.t01 Chr19 2035536~2041782 538 58.57 6.3
VvRCHC139 VIT_19s0090g00400.t01 Chr19 6551526~6553119 220 24.03 6.51
VvRCHC140 VIT_19s0015g01000.t01 Chr19 9081946~9084990 343 39.31 8.81
VvRCHC141 VIT_00s0125g00250.t01 Un 1842078~1866688 497 56.09 5.07
VvRCHC142 VIT_00s0264g00020.t01 Un 18991085~18993638 235 25.36 5.02
VvRCHC143 VIT_00s0349g00040.t01 Un 24940977~24941538 135 15.22 8.12
  1. aaa amino acid
  2. bkDa kilo Dalton
  3. cpI isoelectric point