Table 2 bna-miRNA targets BnaDELLA genes
miRNA_Acc | Gene symbol | Target_Acc | Target start | Target end | miRNA aligned fragment | Alignment length | e-value |
|---|---|---|---|---|---|---|---|
bna-miR6029 | BnaC07RGA | BnaC07G0269400ZS | 590 | 610 | UGGGGUUGUGAUUUCAGGCUU | 21 | 5 |
bna-miR6031 | BnaA09GAI | BnaA09G0218400ZS | 1667 | 1690 | AAGAGGUUCGGAGCGGUUUGAAGC | 24 | 5 |
bna-miR6036 | BnaA09GAI | BnaA09G0218400ZS | 1581 | 1591 | AUAGUACUAGUACUUGCAUGAUCA | 11 | 5.5 |
BnaC09GAI | BnaC09G0254100ZS | 1551 | 1561 | 11 | 5.4 | ||
BnaA06RGA | BnaA06G0409200ZS | 1563 | 1573 | 11 | 5.4 | ||
BnaC07RGA | BnaC07G0269400ZS | 566 | 578 | 13 | 0.35 | ||
bna-miR6028 | BnaC09GAI | BnaC09G0254100ZS | 1635 | 1645 | UGGAGAGUAAGGACAUUCAGA | 11 | 5.4 |
BnaA06RGA | BnaA06G0409200ZS | 1647 | 1657 | 11 | 5.4 | ||
BnaC07RGA | BnaC07G0269400ZS | 1659 | 1669 | 11 | 5.4 | ||
bna-miR390a | BnaA06RGA | BnaA06G0409200ZS | 275 | 285 | AAGCUCAGGAGGGAUAGCGCC | 11 | 5.4 |
bna-miR171f | BnaA06RGA | BnaA06G0409200ZS | 888 | 898 | UGAUUGAGCCGCGCCAAUAUC | 11 | 5.4 |
bna-miR156b | BnaC07RGA | BnaC07G0269400ZS | 108 | 123 | UUGACAGAAGAUAGAGAGCAC | 16 | 1.4 |
bna-miR168b | BnaC07RGA | BnaC07G0269400ZS | 1079 | 1089 | UCGCUUGGUGCAGGUCGAGAA | 11 | 5.4 |
bna-miR160a | BnaC07RGA | BnaC07G0269400ZS | 1530 | 1540 | UGCCUGGCUCCCUGUAUGCCA | 11 | 5.4 |
bna-miR2111a | BnaC02RGL1 | BnaC02G0205300ZS | 1375 | 1391 | GUCCUCGGGAUGCGGAUUACC | 17 | 0.31 |
bna-miR172b | BnaC02RGL1 | BnaC02G0205300ZS | 1038 | 1048 | GGAAUCUUGAUGAUGCUGCAU | 11 | 4.8 |
bna-miR166e | BnaC02RGL1 | BnaC02G0205300ZS | 612 | 623 | UCGGACCAGGCUUCAUUCCCC | 12 | 1.2 |
bna-miR166a | BnaA02RGL1 | BnaA02G0160500ZS | 1187 | 1198 | UCGGACCAGGCUUCAUUCCCC | 12 | 1.2 |
bna-miR6030 | BnaC02RGL1 | BnaC02G0205300ZS | 736 | 746 | UCCACCCAUACCAUACAGACCC | 11 | 4.8 |
bna-miR2111c | BnaC02RGL1 | BnaC02G0205300ZS | 1288 | 1298 | UAAUCUGCAUCCUGGGGUUUA | 11 | 4.8 |
bna-miR172b | BnaA02RGL1 | BnaA02G0160500ZS | 1041 | 1051 | GGAAUCUUGAUGAUGCUGCAU | 11 | 4.8 |
BnaA05RGL2 | BnaA05G0486300ZS | 745 | 755 | 11 | 5.1 | ||
bna-miR390a | BnaA10RGL3 | BnaA10G0194400ZS | 1442 | 1452 | AAGCUCAGGAGGGAUAGCGCC | 11 | 4.9 |
bna-miR168a | BnaC09RGL3 | BnaC09G0489900ZS | 404 | 414 | AAGCUCAGGAGGGAUAGCGCC | 11 | 4.9 |