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Table 7 Summary of significant SNPs associated with root length and seed coat color within the linkage groups (LG) identified by each model during GWAS in sesame

From: Genome-wide association study and its applications in the non-model crop Sesamum indicum

Trait LG GWAS models
mrMLM FASTmrEMMA mrMLM Emmax
Root length LG1 167 163 162
LG4 7 6 0
LG5 7 3 0
LG7 1 1 1
LG10 5 5 0
LG15 3 3 0
Total 190 181 163
Seed coat color LG1 0 4 0
LG4 0 0 0
LG6 67 89 142
LG7 0 1 1
LG12 0 349 0
LG16 0 48 0
Total 67 491 143