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Table 4 Characteristics and models selected in ML and BI phylogenetic analyses with different subsets of data

From: Comparative analysis of chloroplast genome structure and molecular dating in Myrtales

Datasets Number of taxa Number of sites Number of variable/Parsimony informative sites Best fit Model Model in ML Model in BI
Whole plastid genomes 95 130,398 57,674/38001 GTR + I + G GTR + G GTR + I + G
Coding 95 71,672 28,966/19612 GTR + I + G GTR + G GTR + I + G
Non-coding 95 107,087 52,927/34467 GTR + I + G GTR + G GTR + I + G
IRb 95 66,767 24,634/10015 TVM + G GTR + G TVM + G
LSC 95 181,032 90,119/49802 TVM + I + G GTR + G TVM + I + G
SSC 95 34,453 19,663/12511 GTR + G GTR + G GTR + G
NON-IRa 95 251,669 103,802/65656 GTR + G GTR + G GTR + G