Linkage Group | Chromosome assignment | No. of SNPs | Map distance (cM) | Average loci interval (cM) | Physical Length (Mbp) | Average physical interval (Mbp) | Total length A. hypogaea genome (Mbp) | Coverage ratio | Recombination rate (cM/Mbp) |
---|---|---|---|---|---|---|---|---|---|
A01 | Arahy.01 | 27 | 43.3 | 1.6 | 96.4 | 3.6 | 112.42 | 0.86 | 0.39 |
A02 | Arahy.02 | 35 | 91.7 | 2.6 | 96.1 | 2.7 | 102.98 | 0.93 | 0.89 |
A03_1 | Arahy.03 | 80 | 61.9 | 0.8 | 39.2 | 0.5 | 143.81 | 0.27 | 0.43 |
A03_2 | 34 | 24.6 | 0.7 | 4.6 | 0.1 | 143.81 | 0.03 | 0.17 | |
A04 | Arahy.04 | 123 | 167.4 | 1.4 | 124.6 | 1 | 128.8 | 0.97 | 1.3 |
A05 | Arahy.05 | 21 | 49.6 | 2.4 | 12.5 | 0.6 | 115.93 | 0.11 | 0.43 |
A06 | Arahy.06 | 385 | 244.6 | 0.6 | 115.1 | 0.3 | 115.5 | 1 | 2.12 |
A07 | Arahy.07 | 366 | 203.9 | 0.6 | 79.4 | 0.2 | 81.12 | 0.98 | 2.51 |
A08 | Arahy.08 | 88 | 130.7 | 1.5 | 50.8 | 0.6 | 51.9 | 0.98 | 2.52 |
A09_1 | Arahy.09 | 11 | 10.8 | 1 | 1.7 | 0.2 | 120.52 | 0.01 | 0.09 |
A09_2 | 6 | 29.3 | 4.9 | 99.6 | 16.6 | 120.52 | 0.83 | 0.24 | |
A10 | Arahy.10 | 38 | 66.6 | 1.8 | 109.9 | 2.9 | 117.09 | 0.94 | 0.57 |
B01 | Arahy.11 | 147 | 130.7 | 0.9 | 140.6 | 1 | 149.3 | 0.94 | 0.88 |
B02 | Arahy.12 | 29 | 77.2 | 2.7 | 104.2 | 3.6 | 120.58 | 0.86 | 0.64 |
B03 | Arahy.13 | 38 | 21.8 | 0.6 | 3.4 | 0.1 | 146.73 | 0.02 | 0.15 |
B04 | Arahy.14 | 36 | 42.7 | 1.2 | 124.3 | 3.5 | 143.24 | 0.87 | 0.3 |
B05_1 | Arahy.15 | 15 | 28.2 | 1.9 | 112.1 | 7.5 | 160.88 | 0.7 | 0.18 |
B05_2 | 17 | 25.2 | 1.5 | 3.1 | 0.2 | 160.88 | 0.02 | 0.16 | |
B06 | Arahy.16 | 231 | 129.9 | 0.6 | 131.9 | 0.6 | 154.81 | 0.85 | 0.84 |
B07 | Arahy.17 | 23 | 48.2 | 2.1 | 119.7 | 5.2 | 134.92 | 0.89 | 0.36 |
B08 | Arahy.18 | 35 | 59.1 | 1.7 | 124.8 | 3.6 | 135.15 | 0.92 | 0.44 |
B09 | Arahy.19 | 24 | 56.8 | 2.4 | 129.8 | 5.4 | 158.63 | 0.82 | 0.36 |
B10_1 | Arahy.20 | 18 | 19.9 | 1.1 | 127.9 | 7.1 | 143.98 | 0.89 | 0.14 |
B10_2 | 6 | 9.4 | 1.6 | 0.9 | 0.2 | 143.98 | 0.01 | 0.07 | |
 | Mean | 76.4 | 73.9 | 1.6 | 81.3 | 2.8 | 129.4 | 0.6 | 0.7 |
 | Total | 1833 | 1773.5 | 38.2 | 1952.6 | 67.3 | 3107.5 | 15.7 | 16.2 |