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Table 3 Description of genetic linkage groups. Physical distance was determined by blasting markers against the A. hypogaea reference genome (peanutbase.org)

From: Identification of consistent QTL for time to maturation in Virginia-type Peanut (Arachis hypogaea L.)

Linkage

Group

Chromosome

assignment

No. of SNPs

Map distance (cM)

Average loci interval (cM)

Physical Length (Mbp)

Average physical interval (Mbp)

Total length A. hypogaea genome (Mbp)

Coverage ratio

Recombination rate (cM/Mbp)

A01

Arahy.01

27

43.3

1.6

96.4

3.6

112.42

0.86

0.39

A02

Arahy.02

35

91.7

2.6

96.1

2.7

102.98

0.93

0.89

A03_1

Arahy.03

80

61.9

0.8

39.2

0.5

143.81

0.27

0.43

A03_2

34

24.6

0.7

4.6

0.1

143.81

0.03

0.17

A04

Arahy.04

123

167.4

1.4

124.6

1

128.8

0.97

1.3

A05

Arahy.05

21

49.6

2.4

12.5

0.6

115.93

0.11

0.43

A06

Arahy.06

385

244.6

0.6

115.1

0.3

115.5

1

2.12

A07

Arahy.07

366

203.9

0.6

79.4

0.2

81.12

0.98

2.51

A08

Arahy.08

88

130.7

1.5

50.8

0.6

51.9

0.98

2.52

A09_1

Arahy.09

11

10.8

1

1.7

0.2

120.52

0.01

0.09

A09_2

6

29.3

4.9

99.6

16.6

120.52

0.83

0.24

A10

Arahy.10

38

66.6

1.8

109.9

2.9

117.09

0.94

0.57

B01

Arahy.11

147

130.7

0.9

140.6

1

149.3

0.94

0.88

B02

Arahy.12

29

77.2

2.7

104.2

3.6

120.58

0.86

0.64

B03

Arahy.13

38

21.8

0.6

3.4

0.1

146.73

0.02

0.15

B04

Arahy.14

36

42.7

1.2

124.3

3.5

143.24

0.87

0.3

B05_1

Arahy.15

15

28.2

1.9

112.1

7.5

160.88

0.7

0.18

B05_2

17

25.2

1.5

3.1

0.2

160.88

0.02

0.16

B06

Arahy.16

231

129.9

0.6

131.9

0.6

154.81

0.85

0.84

B07

Arahy.17

23

48.2

2.1

119.7

5.2

134.92

0.89

0.36

B08

Arahy.18

35

59.1

1.7

124.8

3.6

135.15

0.92

0.44

B09

Arahy.19

24

56.8

2.4

129.8

5.4

158.63

0.82

0.36

B10_1

Arahy.20

18

19.9

1.1

127.9

7.1

143.98

0.89

0.14

B10_2

6

9.4

1.6

0.9

0.2

143.98

0.01

0.07

 

Mean

76.4

73.9

1.6

81.3

2.8

129.4

0.6

0.7

 

Total

1833

1773.5

38.2

1952.6

67.3

3107.5

15.7

16.2