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Table 2 Overview of yearly changes in the network, based on the individual year summaries (for example Supplementary File 2). Each column represents a year, with an eventual neighbor of flesh color nodes listed in each row. The distances are the shortest path, at the time, from the node indicated to any flesh color node

From: Extracting knowledge networks from plant scientific literature: potato tuber flesh color as an exemplary trait

node / year

2000

2001

2002

2003

2004

2005

2006

2007

2008

2009

2010

2011

2012

2013

2014

2015

2016

CCD

x

x

x

x

3

3

3

3

3

3

1

1

1

1

1

1

1

CHY

x

x

x

x

x

x

x

2

2

2

1

1

1

1

1

1

1

DXS

1

1

1

1

1

1

1

1

1

1

1

1

1

1

1

1

1

PSY

2

2

2

2

2

1

1

1

1

1

1

1

1

1

1

1

1

TP

x

x

x

x

x

x

x

x

x

3

3

2

2

2

2

2

1

abscisic acid

x

x

4

2

2

2

2

2

2

1

1

1

1

1

1

1

1

aminocyclopropane-1-carboxylic acid

x

x

x

x

x

5

5

5

5

1

1

1

1

1

1

1

1

anthocyanin

x

x

x

x

x

x

x

x

x

1

1

1

1

1

1

1

1

beta-carotene hydroxylase

x

x

4

4

4

4

4

2

2

2

1

1

1

1

1

1

1

bHLH

x

x

x

x

x

x

x

x

x

1

1

1

1

1

1

1

1

carotenoid

1

1

1

1

1

1

1

1

1

1

1

1

1

1

1

1

1

chlorophyll

x

x

x

x

x

3

3

3

1

1

1

1

1

1

1

1

1

ethylene

x

x

x

x

x

5

5

5

5

3

1

1

1

1

1

1

1

flavonoid

x

x

x

1

1

1

1

1

1

1

1

1

1

1

1

1

1

flavonol

x

x

x

x

x

x

x

x

x

x

x

x

x

x

1

1

1

hydroxycinnamic acid

x

x

x

x

x

x

x

x

1

1

1

1

1

1

1

1

1

lycopene

3

2

2

2

2

2

2

2

2

2

1

1

1

1

1

1

1

lycopene e-cyclase

x

x

x

x

x

x

2

2

2

2

1

1

1

1

1

1

1

phenolic

x

x

x

x

3

3

2

2

2

2

2

2

2

2

2

2

1

phenylalanine ammonia lyase

x

x

x

x

x

x

x

x

x

x

x

x

3

3

3

3

1

zeaxanthin epoxidase

x

x

3

3

3

3

3

2

2

2

1

1

1

1

1

1

1