Table 1 Characterization of the CaCA family proteins in apple
Group | Gene ID | Name | Length (aa) | Mass Weight (kDa) | Charge at PH 7.0 | pI | Genomic Location | Best hits | Name (Arabidopsis) |
|---|---|---|---|---|---|---|---|---|---|
CAX | MD17G1143500 | MdCAX2L-1 | 400 (433) | 47.77 | −10.34 | 5.42 | Chr 17: 12,932,234-12,937,843 | AT3G13320.1 | CAX2 |
MD09G1157100 | MdCAX2L-2 | 513 (433) | 47.71 | −15.17 | 5.00 | Chr 09: 12,520,620-12,526,155 | AT3G13320.1 | CAX2 | |
MD04G1151600 | MdCAX3L-1 | 450 | 48.32 | −4.81 | 6.08 | Chr 04: 24,048,771-24,052,948 | AT3G51860.1 | CAX3 | |
MD12G1165800 | MdCAX3L-2 | 458 (450) | 49.53 | −0.80 | 6.81 | Chr 12: 24,665,244-24,669,792 | AT3G51860.1 | CAX3 | |
MD03G1070900 | MdCAX3L-3 | 451 | 49.38 | −5.85 | 5.81 | Chr 03: 5,786,105-5,790,084 | AT3G51860.1 | CAX3 | |
MD11G1074900 | MdCAX3L-4 | 453 | 49.76 | −10.04 | 5.11 | Chr 11: 6,348,409-6,352,616 | AT3G51860.1 | CAX3 | |
MD04G1151900 | MdCAX3L-5 | 438 | 47.73 | −9.79 | 5.31 | Chr 04: 24,108,144-24,112,570 | AT3G51860.1 | CAX3 | |
MD11G1041700 | MdCAX5L-1 | 450 | 49.32 | −12.86 | 4.99 | Chr 11: 3,560,349-3,565,335 | AT1G55730.2 | CAX5 | |
MD03G1040300 | MdCAX5L-2 | 447 | 48.92 | −10.03 | 5.15 | Chr 03: 3,192,551–3,197,506 | AT1G55730.2 | CAX5 | |
MD09G1134300 | MdCAX5L-3 | 463 | 50.50 | −11.49 | 5.33 | Chr 09: 10,321,364-10,325,618 | AT1G55730.2 | CAX5 | |
MD17G1123100 | MdCAX5L-4 | 434 | 47.33 | −10.30 | 5.54 | Chr 17: 10,683,015-10,689,101 | AT1G55730.2 | CAX5 | |
CCX | MD12G1011500 | MdCCX1 | 581 | 63.37 | + 3.24 | 7.76 | Chr 12: 1,189,557-1,191,302 | AT5G17860.1 | CCX1 |
MD12G1011800 | MdCCX2 | 571 | 62.43 | + 10.97 | 8.43 | Chr 12: 1,218,407-1,220,122 | AT5G17850.1 | CCX2 | |
MD15G1219100 | MdCCX3 | 653 | 71.44 | + 2.51 | 7.66 | Chr 15: 17,708,721-17,711,343 | AT1G54115.1 | CCX4 | |
MD02G1094200 | MdCCX4 | 653 | 71.57 | + 0.65 | 7.18 | Chr 02: 7,479,499-7,481,507 | AT1G54115.1 | CCX4 | |
MD04G1207600 | MdCCX5 | 546 | 59.29 | + 3.31 | 7.86 | Chr 04: 29,274,566-29,277,830 | AT1G08960.1 | CCX5 | |
MHX1 | MD03G1288600 | MdMHX1 | 530 | 59.19 | −7.76 | 5.65 | Chr 03: 36,723,856-36,727,511 | AT2G47600.1 | MHX1 |
NCL | MD03G1238600 | MdNCL-1 | 586 | 63.75 | −12.20 | 5.44 | Chr 03: 32,378,315-32,388,912 | AT1G53210.1 | NCL |
MD03G1238700 | MdNCL-2 | 609 | 67.07 | −15.18 | 5.22 | Chr 03: 32,389,435-32,393,941 | AT1G53210.1 | NCL | |
MD11G1258400 | MdNCL-3 | 584 | 63.27 | −16.53 | 4.91 | Chr 11: 37,186,082-37,191,361 | AT1G53210.1 | NCL | |
MD17G1233800 | MdNCL-4 | 585 | 64.56 | −7.42 | 5.28 | Chr 17: 28,245,403-28,250,477 | AT1G53210.1 | NCL |