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Table 2 Transcripts differentially expressed in the shoot tips between normal and dwarfed individuals of the Vitis vinifera cv. Cabernet-Sauvignon x V. riparia cv. Gloire de Montpellier F2 population (CS x RGM_F2)

From: Dissecting the control of shoot development in grapevine: genetics and genomics identify potential regulators

 Expression level (log2) 
Microarray identifierMean DwarfedMean NormalDwarf - Normalp value adjusted with HolmGene identifier V2Gene nameCRIBI annotation
CHRUN_JGVV1308_2_T015.211.1−6.00.00VIT_200s1308g00020 upf0308 protein chloroplastic-like
CHRUN_JGVV566_1_T015.010.4−5.40.00VIT_200s0566g00010 upf0308 protein chloroplastic-like
CHR7_JGVV31_29_T015.310.6−5.40.00VIT_207s0031g00320CLF/CURLY LEAFpolycomb protein ez1 set domain protein
CHR7_JGVV31_32_T016.211.3−5.10.00VIT_207s0031g00350CCoAOMTcaffeoyl-coa o-methyltransferase
CHR7_JGVV31_30_T016.210.7−4.50.00VIT_207s0031g00330 pi-plc x domain-containing protein at5g67130-like
CHR7_JGVV31_31_T015.79.5−3.80.00VIT_207s0031g00340 f-box protein
CHR7_JGVV5_241_T015.98.9−3.00.03VIT_207s0005g02490CYP709B2cytochrome p450
CHR5_JGVV77_76_T015.67.5−1.90.03VIT_205s0077g01020 probable n-acetyltransferase hookless 1
CHR7_JGVV129_32_T0111.310.31.00.05VIT_207s0129g00290 Formamidase
CHR17_JGVV0_115_T019.07.81.10.01VIT_217s0000g09080MYB50 MYB55 MYB86hypothetical protein r2r3-myb transcription
CHR2_JGVV87_15_T0112.311.11.20.05VIT_202s0087g00840ABCG14white-brown-complex abc transporter family
CHR8_JGVV7_740_T0111.19.91.20.03VIT_208s0007g01180 receptor protein kinase 1-like
CHR8_JGVV40_125_T016.25.01.20.02VIT_208s0040g02020FLA11fasciclin-like arabinogalactan protein 11-like
CHR13_JGVV19_208_T0111.610.01.50.02VIT_213s0019g03130 VIT_213s0019g03120UGT85A2/ UGT85A1udp-glycosyltransferase 85a1
CHR13_JGVV106_5_T019.98.31.50.03VIT_213s0106g00060 ankyrin repeat-containing
CHR6_JGVV9_33_T0112.711.11.60.04VIT_206s0009g03450LPR1lateral root primordium protein
CHR16_JGVV22_167_T016.65.01.60.01VIT_216s0022g00560 paired amphipathic helix protein sin3
CHR7_GSVIVT00000186001_T019.17.51.60.03VIT_207s0129g00750 isoflavone 2 –hydroxylase
CHR19_JGVV85_28_T019.07.31.80.04VIT_219s0085g00950NAC028nac domain ipr003441
CHR3_JGVV17_56_T018.87.01.80.00VIT_203s0017g01010AMC1/Metacaspase-1hypothetical protein
CHR18_RANDOM_JGVV82_56_T018.26.31.90.01VIT_218s0001g04830TPS21/terpene synthase 21beta-caryophyllene synthase
CHR4_JGVV43_22_T017.15.02.10.02VIT_204s0043g00300 hypothetical protein tpx2 (targeting protein for xklp2) family protein
CHR1_JGVV150_30_T018.16.12.10.05VIT_201s0150g00300GH3indole-3-acetic acid-amido synthetase
CHR4_GSVIVT00035889001_T017.95.72.20.05VIT_204s0008g05790 hypothetical protein
CHR7_JGVV129_29_T0110.68.42.20.02VIT_207s0129g00290 formamidase
CHRUN_GSVIVT00006381001_T018.76.52.30.04VIT_200s0358g00020 hypothetical protein
CHR13_RANDOM_JGVV112_22_T0111.28.92.30.01VIT_213s0067g00620 bifunctional dihydroflavonol 4-reductase flavanone 4-reductase
CHR8_JGVV40_238_T0111.89.42.50.04VIT_208s0040g00820CYP94D2cytochrome p450
CHR6_JGVV4_547_T0111.18.52.60.00VIT_206s0004g02580BLH8bel1 homeotic hypothetical protein
CHR2_JGVV25_23_T0110.67.92.70.00VIT_202s0025g00250SP1L5/SPIRAL1-like 5nitrilase-associated protein
CHR16_PDVV115_38_T018.75.92.80.00VIT_216s0115g00410 hypothetical protein
CHR14_GSVIVT00030939001_T018.65.82.80.00VIT_214s0006g02160 probable s-adenosylmethionine-dependent methyltransferase at5g37990
CHR8_JGVV40_281_T0110.47.52.90.02VIT_208s0040g00380 probable s-acyltransferase at5g05070-like
CHR15_JGVV24_108_T019.46.52.90.00VIT_215s0024g00440 disease resistance protein rga3-like
CHR14_JGVV83_93_T018.55.53.00.00VIT_214s0083g01050SEP1mads-box protein
CHR8_JGVV7_766_T0111.98.93.00.01VIT_208s0007g00890 tropinone reductase homolog at1g07440
CHR7_JGVV31_36_T018.45.33.00.02VIT_207s0031g00400 zinc finger protein
CHR12_JGVV35_122_T018.35.13.30.01VIT_212s0035g00900JAZ12/jasmonate-zim-domain protein 12protein tify 3b
CHR5_GSVIVT00029081001_T018.64.93.70.00VIT_205s0051g00880 hypothetical protein
CHRUN_GSVIVT00003451001_T018.24.43.80.00VIT_200s0193g00010 hypothetical protein
CHR19_JGVV15_10_T019.25.33.80.00VIT_219s0015g00100CYP71B7cytochrome p450
CHR17_JGVV0_480_T019.15.23.90.00VIT_217s0000g05000SEP2sepallata1-like protein
CHR14_JGVV108_72_T0110.26.14.10.00VIT_214s0108g00760MIF2Azf-hd homeobox protein at4g24660-like
CHR1_JGVV11_153_T019.45.24.20.01VIT_201s0011g05100MLP34major latex
CHR10_JGVV3_187_T0113.79.44.30.00VIT_210s0003g02070AG SHP1agamous-like protein
CHRUN_JGVV193_1_T019.95.64.30.00VIT_200s0193g00020 hypothetical protein
CHR17_JGVV0_372_T0110.35.74.50.00VIT_217s0000g06200MIF1zf-hd homeobox protein at4g24660-like
CHR15_JGVV24_104_T0110.05.04.90.00VIT_215s0024g00480PP2-A1protein phloem protein 2-like a1
CHR12_JGVV142_18_T0112.57.05.50.00VIT_212s0142g00360SHP1agamous-like protein
CHR14_JGVV81_14_T0111.96.25.70.00VIT_214s0081g00670AHL19, AT-hook motif nuclear-localized protein 19dna-binding protein escarola-like
CHR14_JGVV108_75_T0112.06.06.00.00VIT_214s0108g00810MIF2Bzf-hd homeobox protein at4g24660-like
CHR1_JGVV10_295_T0113.15.77.40.00VIT_201s0010g03900SEP3transcription factor
  1. Log2 fold change > 1, p value < 0.05 adjusted with Holm, n = 5