Characterization of wheat homeodomain-leucine zipper family genes and functional analysis of TaHDZ5-6A in drought tolerance in transgenic Arabidopsis

Li, Shumin; Chen, Nan; Li, Fangfang; Mei, Fangming; Wang, Zhongxue; Cheng, Xinxiu; Kang, Zhensheng; Mao, Hude

doi:10.1186/s12870-020-2252-6

Table 1 Detail information of wheat HD-Zip genes

From: Characterization of wheat homeodomain-leucine zipper family genes and functional analysis of TaHDZ5-6A in drought tolerance in transgenic Arabidopsis

Name	Protein id	chr	Start	End	Number of amino acids	Molecular weight	Theoretical pI	group	Previous nomenclatur e[35]
TaHDZ1-4A	TraesCS4A02G405800	chr4A	678,872,316	678,873,272	285	31,206.22	4.79	I	TaHDZ16-A/Traes_4AL_99A941299
TaHDZ1-4B	TraesCS4B02G305300	chr4B	593,422,292	593,423,732	316	35,099.79	4.99	I	TaHDZ16-B/Traes_4BL_ECD20BE67
TaHDZ1-4D	TraesCS4D02G303500	chr4D	471,961,107	471,962,520	316	34,919.58	4.98	I
TaHDZ2-5A	TraesCS5A02G249000	chr5A	463,452,047	463,453,063	270	28,917.9	4.77	I
TaHDZ2-5B	TraesCS5B02G246700	chr5B	428,461,602	428,462,604	269	28,884.88	4.7	I	TaHDZ22-B/Traes_5BL_5DE02D63E
TaHDZ2-5D	TraesCS5D02G256200	chr5D	362,547,609	362,548,803	270	28,909.87	4.7	I
TaHDZ3-4A	TraesCS4A02G016600	chr4A	11,296,831	11,299,294	338	35,973.87	6.08	I	TaHDZ15-A/Traes_4AS_F04DD4409
TaHDZ3-4B	TraesCS4B02G287600	chr4B	571,047,644	571,049,696	331	36,494.59	6.17	I	TaHDZ15-B/Traes_4BL_BE3E058A6
TaHDZ3-4D	TraesCS4D02G286400	chr4D	457,074,633	457,076,703	330	36,411.5	6.17	I	TaHDZ15-D/Traes_4DL_88ABAD6C0
TaHDZ4-5A	TraesCS5A02G199300	chr5A	404,177,302	404,178,633	300	32,713.28	4.86	I
TaHDZ4-5B	TraesCS5B02G197700	chr5B	356,597,007	356,598,447	299	32,566.01	4.86	I	TaHDZ21-B/Traes_5BL_028D02DF6
TaHDZ4-5D	TraesCS5D02G205000	chr5D	310,677,920	310,679,395	299	32,637.21	4.93	I
TaHDZ5-6A	TraesCS6B02G321100	chr6B	568,257,664	568,259,128	343	37,502.12	4.59	I	TaHDZ24-A/Traes_6AL_36AB0312C
TaHDZ5-6D	TraesCS6D02G272000	chr6D	380,799,345	380,800,814	374	41,012.34	4.82	I	TaHDZ24-D/Traes_6DL_FF4C8C4AB
TaHDZ6-5A	TraesCS5A02G316800	chr5A	527,904,954	527,905,823	249	27,500.54	4.97	I
TaHDZ6-5B	TraesCS5B02G317400	chr5B	501,464,138	501,465,028	249	27,502.62	5.02	I	TaHDZ20-B/Traes_5BL_9C32B27E2
TaHDZ6-5D	TraesCS5D02G323100	chr5D	415,272,394	415,273,274	247	27,246.32	5.09	I	TaHDZ20-D/Traes_5DL_96F9EED93
TaHDZ7-2A	TraesCS2A02G389400	chr2A	637,984,504	637,985,699	265	29,697.25	5.12	I	TaHDZ8-A/Traes_2AL_BFB0C6D4C
TaHDZ7-2B	TraesCS2B02G407600	chr2B	578,605,119	578,605,996	260	29,074.51	5.2	I	TaHDZ8-B/Traes_2BL_B69300543
TaHDZ7-2D	TraesCS2D02G387300	chr2D	492,676,386	492,677,218	243	26,899.14	5.04	I
TaHDZ8-6A	TraesCS6A02G240400	chr6A	451,659,958	451,660,731	221	24,977.72	5.27	I
TaHDZ8-6B	TraesCS6B02G284300	chr6B	512,447,547	512,448,327	226	25,584.39	5.09	I
TaHDZ8-6D	TraesCS6D02G222600	chr6D	314,056,149	314,056,946	225	25,536.5	5.65	I	TaHDZ26-D/Traes_6DS_D281B7D32
TaHDZ9-4A	TraesCS4A02G040600	chr4A	34,026,753	34,027,976	231	25,530.54	6.24	I	TaHDZ17-A/Traes_4AS_1EA23DE08
TaHDZ9-4B	TraesCS4B02G261600	chr4B	530,519,687	530,520,929	233	25,576.61	6.04	I	TaHDZ17-B/Traes_4BL_BE10705D5
TaHDZ9-4D	TraesCS4D02G261600	chr4D	432,748,587	432,749,803	234	25,708.82	6.24	I	TaHDZ17-D/Traes_4DL_4798D0BBD
TaHDZ10-2B	TraesCS2B02G405700	chr2B	573,974,813	573,975,706	221	24,267	7.7	I	TaHDZ7-B/Traes_2BL_419CEED79
TaHDZ10-2D	TraesCS2D02G385500	chr2D	490,117,422	490,118,593	247	27,340.52	7.17	I
TaHDZ11-2A	TraesCS2A02G188500	chr2A	153,452,292	153,453,239	238	25,785.75	7.12	I
TaHDZ11-2B	TraesCS2B02G218800	chr2B	208,210,912	208,211,847	238	25,858.89	7.12	I	TaHDZ6-B/Traes_2BS_BD0ED621D
TaHDZ11-2D	TraesCS2D02G199200	chr2D	148,855,464	148,856,413	238	25,755.72	6.76	I	TaHDZ6-D/Traes_2DS_20F748657
TaHDZ12-6A	TraesCS6A02G120300	chr6A	91,924,600	91,925,404	203	22,045.89	9.64	II
TaHDZ12-6B	TraesCS6B02G148700	chr6B	149,551,263	149,551,965	209	22,641.46	9.41	II
TaHDZ12-6D	TraesCS6D02G110400	chr6D	76,042,794	76,043,516	192	20,888.56	9.79	II	TaHDZ27-D/Traes_6DS_F00EB2E01
TaHDZ13-6A	TraesCS6A02G120600	chr6A	92,054,391	92,055,152	226	24,538.57	8.72	II	TaHDZ25-A/Traes_6AS_3E534A2C1
TaHDZ13-6B	TraesCS6B02G149000	chr6B	149,773,307	149,774,051	220	24,273.43	9.32	II
TaHDZ13-6D	TraesCS6D02G110600	chr6D	76,064,358	76,065,121	225	24,759.74	8.38	II	TaHDZ25-D/Traes_6DS_17B737547
TaHDZ14-7A	TraesCS7A02G423800	chr7A	616,552,387	616,553,258	219	24,421.47	9.25	II	TaHDZ28-A/Traes_7AL_44206BE21
TaHDZ14-7B	TraesCS7B02G326300	chr7B	579,825,401	579,826,290	223	24,708.84	9.47	II
TaHDZ14-7D	TraesCS7D02G417700	chr7D	536,514,689	536,515,582	222	24,526.65	9.61	II	TaHDZ28-D/Traes_7DL_2FE5181AF
TaHDZ15-1A	TraesCS1A02G372900	chr1A	549,301,452	549,303,005	305	33,195.14	6.27	II
TaHDZ15-1B	TraesCS1B02G393100	chr1B	626,097,677	626,098,967	306	33,662.73	6.68	II	TaHDZ3-B/Traes_1BL_BCA60D8B6
TaHDZ15-1D	TraesCS1D02G379700	chr1D	455,759,848	455,761,548	304	33,117.06	6.67	II
TaHDZ16-4A	TraesCS4A02G059600	chr4A	56,143,977	56,145,391	275	29,373.91	6.67	II
TaHDZ16-4B	TraesCS4B02G235300	chr4B	491,464,360	491,465,839	277	29,618.16	6.67	II	TaHDZ18-B/Traes_4BL_78DD63002
TaHDZ16-4D	TraesCS4D02G236600	chr4D	398,669,293	398,670,678	274	29,332.85	6.67	II
TaHDZ17-3B	TraesCS3B02G000100	chr3B	213,438	214,466	228	25,282.62	8.64	II	TaHDZ10-B/TRAES3BF043500070CFD
TaHDZ17-3D	TraesCS3D02G009700	chr3D	3,294,033	3,295,097	226	24,874.23	9.24	II	TaHDZ10-D/Traes_3DS_7CCB5ECD2
TaHDZ18-5A	TraesCS5A02G232700	chr5A	448,090,083	448,091,497	351	36,587.01	7.01	II
TaHDZ18-5B	TraesCS5B02G231300	chr5B	407,816,831	407,818,230	355	37,049.33	6.27	II	TaHDZ19-B/Traes_5BL_4A3874701
TaHDZ18-5D	TraesCS5D02G235300	chr5D	344,398,948	344,400,554	339	35,808.01	6.49	II
TaHDZ19-3A	TraesCS3A02G231600	chr3A	432,374,494	432,377,827	222	24,782.22	9.17	II
TaHDZ19-3B	TraesCS3B02G260800	chr3B	418,718,384	418,721,923	222	24,704.13	9.42	II	TaHDZ11-B/TRAES3BF026400090CFD
TaHDZ19-3D	TraesCS3D02G221800	chr3D	302,265,801	302,269,312	222	24,776.24	9.27	II
TaHDZ20-1A	TraesCS1A02G219200	chr1A	387,840,646	387,841,766	329	35,072.38	8.71	II	TaHDZ4-A/Traes_1AL_1444D461A
TaHDZ20-1B	TraesCS1B02G232700	chr1B	418,105,692	418,106,801	327	34,775.13	8.88	II
TaHDZ20-1D	TraesCS1D02G220900	chr1D	308,459,300	308,460,410	326	34,691.06	8.89	II
TaHDZ21-2A	TraesCS2A02G415900	chr2A	672,415,211	672,416,239	227	25,675.08	8.84	II	TaHDZ9-A/Traes_2AL_EF9549D16
TaHDZ21-2B	TraesCS2B02G434900	chr2B	624,891,321	624,892,387	230	26,196.48	8.84	II	TaHDZ9-B/Traes_2BL_02479C76A
TaHDZ21-2D	TraesCS2D02G412900	chr2D	527,546,793	527,547,829	230	25,914.27	8.84	II	TaHDZ9-D/Traes_2DL_67F1183B2
TaHDZ22-4A	TraesCS4A02G382400	chr4A	660,653,849	660,655,014	344	36,296.63	9.53	II
TaHDZ23-7A	TraesCS7A02G083800	chr7A	48,525,735	48,526,646	266	28,231.91	9.16	II	TaHDZ14-A/Traes_4AL_822582A19
TaHDZ23-7D	TraesCS7D02G079000	chr7D	46,711,457	46,712,351	269	28,558.14	9.26	II
TaHDZ24-3A	TraesCS3A02G312800	chr3A	552,611,093	552,615,178	874	94,707.86	6.06	III
TaHDZ24-3B	TraesCS3B02G159100	chr3B	154,220,609	154,224,807	841	91,388.76	5.95	III
TaHDZ24-3D	TraesCS3D02G141500	chr3D	103,645,450	103,649,526	845	91,803.17	5.92	III
TaHDZ25-1A	TraesCS1A02G157500	chr1A	279,733,261	279,742,276	840	92,041.09	5.65	III	TaHDZ1-A/Traes_1AL_0BE456AC0
TaHDZ25-1B	TraesCS1B02G173900	chr1B	311,419,246	311,427,777	840	92,056.14	5.65	III	TaHDZ1-B/Traes_1BL_43408C9B0
TaHDZ25-1D	TraesCS1D02G155200	chr1D	217,636,182	217,644,644	606	66,231.68	6.31	III
TaHDZ26-4B	TraesCS4B02G385200	chr4B	664,152,394	664,159,763	839	91,509.33	5.55	III
TaHDZ26-4D	TraesCS4D02G359600	chr4D	506,968,051	506,975,377	838	91,591.45	5.61	III
TaHDZ27-5A	TraesCS5A02G375800	chr5A	573,645,493	573,651,017	862	93,733.6	6.09	III
TaHDZ27-5B	TraesCS5B02G378000	chr5B	556,177,511	556,182,640	862	93,776.77	6.09	III
TaHDZ27-5D	TraesCS5D02G385300	chr5D	454,414,315	454,419,575	862	93,676.55	6.09	III
TaHDZ28-5A	TraesCS5A02G043400	chr5A	39,845,363	39,851,741	846	91,939.04	6.1	III
TaHDZ28-5B	TraesCS5B02G047200	chr5B	53,246,630	53,252,235	879	95,339.96	6.61	III	TaHDZ23-B/Traes_5BS_360DD5644
TaHDZ28-5D	TraesCS5D02G052300	chr5D	50,483,246	50,488,859	883	95,733.49	6.73	III	TaHDZ23-D/Traes_5DS_50846FD0C
TaHDZ29-3A	TraesCS3A02G325800	chr3A	571,174,922	571,179,414	683	74,860.15	7.92	IV
TaHDZ29-3B	TraesCS3B02G354900	chr3B	565,265,645	565,270,023	683	74,621.82	8.17	IV	TaHDZ13-B/TRAES3BF075200070CFD
TaHDZ29-3D	TraesCS3D02G319200	chr3D	433,133,441	433,137,721	683	74,697.92	7.58	IV	TaHDZ13-D/Traes_3DL_8AAFB7B06
TaHDZ30-4A	TraesCS4A02G231300	chr4A	540,600,328	540,604,473	770	83,653.94	6.99	IV
TaHDZ30-4B	TraesCS4B02G084700	chr4B	83,052,927	83,058,776	788	85,693.54	6.36	IV
TaHDZ30-4D	TraesCS4D02G082600	chr4D	56,025,816	56,030,159	805	87,663.69	6.79	IV
TaHDZ31-5A	TraesCS5A02G330200	chr5A	539,504,162	539,509,761	744	80,684.05	6.1	IV
TaHDZ31-5B	TraesCS5B02G330300	chr5B	514,678,511	514,683,625	751	81,666.17	6.02	IV
TaHDZ31-5D	TraesCS5D02G335900	chr5D	425,465,587	425,471,148	753	82,053.73	5.8	IV
TaHDZ32-3A	TraesCS3A02G305300	chr3A	541,243,574	541,247,038	761	82,154.35	7.49	IV
TaHDZ32-3B	TraesCS3B02G331200	chr3B	536,388,767	536,392,301	755	81,462.58	7.8	IV	TaHDZ12-B/TRAES3BF023000040CFD
TaHDZ32-3D	TraesCS3D02G296500	chr3D	410,412,719	410,416,215	778	84,493.39	9.14	IV
TaHDZ33-6A	TraesCS6A02G324500	chr6A	558,785,948	558,788,800	685	75,094.44	6.33	IV
TaHDZ33-6B	TraesCS6B02G354900	chr6B	623,081,402	623,084,291	697	75,242.66	6.48	IV
TaHDZ33-6D	TraesCS6D02G304300	chr6D	413,269,725	413,272,565	685	75,009.28	6.25	IV
TaHDZ34-7A	TraesCS7A02G167900	chr7A	124,067,724	124,070,795	725	79,209	6.13	IV
TaHDZ34-7B	TraesCS7B02G072700	chr7B	80,658,897	80,662,738	730	79,513.39	6.19	IV
TaHDZ34-7D	TraesCS7D02G168700	chr7D	119,565,615	119,569,016	732	79,795.75	6.22	IV
TaHDZ35-1A	TraesCS1A02G193400	chr1A	350,395,750	350,401,039	873	94,078.96	5.68	IV
TaHDZ35-1B	TraesCS1B02G208400	chr1B	377,965,083	377,969,806	890	96,021.18	5.57	IV
TaHDZ35-1D	TraesCS1D02G197300	chr1D	278,105,002	278,110,971	883	95,091.14	5.64	IV	TaHDZ2-D/Traes_1DL_9FB53E48A
TaHDZ36-6A	TraesCS6A02G255800	chr6A	474,327,845	474,334,088	804	86,379.32	5.51	IV
TaHDZ36-6B	TraesCS6B02G269700	chr6B	485,537,128	485,542,736	804	86,399.39	5.51	IV
TaHDZ36-6D	TraesCS6D02G237000	chr6D	335,062,906	335,068,647	804	86,465.43	5.46	IV
TaHDZ37-2A	TraesCS2A02G401200	chr2A	654,907,253	654,913,197	798	85,781.8	5.54	IV
TaHDZ37-2B	TraesCS2B02G419200	chr2B	600,740,018	600,745,678	785	84,370.1	5.92	IV
TaHDZ37-2D	TraesCS2D02G398600	chr2D	511,688,028	511,693,305	784	84,013.06	5.87	IV	TaHDZ5-D/Traes_2DL_036F2A3FC
TaHDZ38-5A	TraesCS5A02G314400	chr5A	524,906,817	524,907,230	849	90,375.05	5.7	IV
TaHDZ38-5B	TraesCS5B02G315100	chr5B	497,213,945	497,219,576	849	90,378.01	5.7	IV
TaHDZ38-5D	TraesCS5D02G320600	chr5D	412,738,548	412,744,058	849	90,401.09	5.7	IV
TaHDZ39-7A	TraesCS7A02G308400	chr7A	436,693,693	436,698,045	796	85,517.17	5.99	IV
TaHDZ39-7B	TraesCS7B02G208600	chr7B	381,824,085	381,829,068	798	85,647.27	5.99	IV
TaHDZ39-7D	TraesCS7D02G305200	chr7D	386,725,334	386,730,432	796	85,592.19	5.99	IV
TaHDZ40-2A	TraesCS2A02G474000	chr2A	715,337,511	715,343,047	777	83,524.33	5.59	IV
TaHDZ40-2B	TraesCS2B02G497500	chr2B	694,054,407	694,060,937	775	83,454.3	5.65	IV
TaHDZ40-2D	TraesCS2D02G473700	chr2D	577,152,396	577,158,953	776	83,438.3	5.59	IV

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