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Table 1 Members of the AP2/ERF gene family in rose genome

From: Global analysis of the AP2/ERF gene family in rose (Rosa chinensis) genome unveils the role of RcERF099 in Botrytis resistance

Gene

Accession numbera

Chr.b

Positionc

Intro

Exon

CDS (bp)

AAd

Subfamily

RcERF001

RchiOBHm_Chr1g0331141

1

20.92

6

7

1203

401

AP2

RcERF002

RchiOBHm_Chr1g0346421

1

38.78

0

1

831

277

DREB

RcERF003

RchiOBHm_Chr1g0347621

1

40.31

0

1

819

273

ERF

RcERF004

RchiOBHm_Chr1g0347631

1

40.33

0

1

639

213

ERF

RcERF005

RchiOBHm_Chr1g0347641

1

40.38

0

1

717

239

ERF

RcERF006

RchiOBHm_Chr1g0347661

1

40.38

0

1

651

217

ERF

RcERF007

RchiOBHm_Chr1g0347671

1

40.38

0

1

612

204

ERF

RcERF008

RchiOBHm_Chr1g0349631

1

42.73

0

1

711

237

ERF

RcERF009

RchiOBHm_Chr1g0358681

1

50.76

0

1

903

301

ERF

RcERF010

RchiOBHm_Chr1g0360021

1

51.85

0

1

633

211

DREB

RcERF011

RchiOBHm_Chr1g0360081

1

51.90

2

3

1032

344

DREB

RcERF012

RchiOBHm_Chr1g0364341

1

55.52

8

9

1371

457

AP2

RcERF013

RchiOBHm_Chr1g0370631

1

60.12

0

1

987

329

DREB

RcERF014

RchiOBHm_Chr1g0371151

1

60.47

1

1

1152

384

DREB

RcERF015

RchiOBHm_Chr1g0373621

1

61.76

0

1

858

286

ERF

RcERF016

RchiOBHm_Chr1g0373631

1

61.77

0

1

879

293

ERF

RcERF017

RchiOBHm_Chr1g0373641

1

61.77

0

1

642

214

ERF

RcERF018

RchiOBHm_Chr1g0376641

1

63.85

0

1

693

231

DREB

RcERF019

RchiOBHm_Chr1g0376651

1

63.86

0

1

699

233

DREB

RcERF020

RchiOBHm_Chr1g0380021

1

65.82

0

1

1092

364

ERF

RcERF021

RchiOBHm_Chr2g0088321

2

2.93

1

2

615

205

DREB

RcERF022

RchiOBHm_Chr2g0091471

2

5.12

0

1

765

255

DREB

RcERF023

RchiOBHm_Chr2g0095581

2

8.53

0

1

630

210

DREB

RcERF024

RchiOBHm_Chr2g0105221

2

16.56

0

1

699

233

ERF

RcERF025

RchiOBHm_Chr2g0105401

2

16.68

0

1

726

242

ERF

RcERF026

RchiOBHm_Chr2g0105461

2

16.74

0

1

639

213

ERF

RcERF027

RchiOBHm_Chr2g0105481

2

16.76

0

1

579

193

ERF

RcERF028

RchiOBHm_Chr2g0105501

2

16.78

0

1

543

181

ERF

RcERF029

RchiOBHm_Chr2g0105521

2

16.81

0

1

624

208

ERF

RcERF030

RchiOBHm_Chr2g0106221

2

17.67

9

10

1605

535

AP2

RcERF031

RchiOBHm_Chr2g0106241

2

17.71

0

1

519

173

DREB

RcERF032

RchiOBHm_Chr2g0108831

2

20.29

8

9

1980

660

AP2

RcERF033

RchiOBHm_Chr2g0111031

2

22.67

8

8

1629

543

AP2

RcERF034

RchiOBHm_Chr2g0115041

2

27.01

1

1

1047

349

ERF

RcERF035

RchiOBHm_Chr2g0118211

2

30.54

1

2

966

322

ERF

RcERF036

RchiOBHm_Chr2g0118251

2

30.58

1

2

1164

388

ERF

RcERF037

RchiOBHm_Chr2g0126301

2

40.60

0

1

1398

466

ERF

RcERF038

RchiOBHm_Chr2g0130611

2

46.70

0

1

537

179

ERF

RcERF039

RchiOBHm_Chr2g0132251

2

48.70

6

7

1074

358

AP2

RcERF040

RchiOBHm_Chr2g0133451

2

50.24

1

2

603

201

DREB

RcERF041

RchiOBHm_Chr2g0133601

2

50.47

0

1

888

296

ERF

RcERF042

RchiOBHm_Chr2g0135921

2

53.15

1

2

582

194

DREB

RcERF043

RchiOBHm_Chr2g0139661

2

57.18

0

1

786

262

DREB

RcERF044

RchiOBHm_Chr2g0145271

2

62.91

8

9

1731

577

AP2

RcERF045

RchiOBHm_Chr2g0147651

2

65.22

2

2

1176

392

ERF

RcERF046

RchiOBHm_Chr2g0157901

2

74.24

0

1

693

231

ERF

RcERF047

RchiOBHm_Chr2g0160621

2

76.47

1

1

582

194

DREB

RcERF048

RchiOBHm_Chr2g0163201

2

78.78

0

1

909

303

RAV

RcERF049

RchiOBHm_Chr2g0166851

2

81.58

0

1

1071

357

ERF

RcERF050

RchiOBHm_Chr2g0167081

2

81.74

0

1

1257

419

ERF

RcERF051

RchiOBHm_Chr2g0169071

2

83.36

4

5

1377

459

AP2

RcERF052

RchiOBHm_Chr3g0447531

3

0.21

7

8

2496

832

AP2

RcERF053

RchiOBHm_Chr3g0449251

3

1.12

9

8

804

268

Soloist

RcERF054

RchiOBHm_Chr3g0450011

3

1.66

0

1

702

234

ERF

RcERF055

RchiOBHm_Chr3g0450351

3

1.92

0

1

900

300

ERF

RcERF056

RchiOBHm_Chr3g0461691

3

9.68

1

2

1791

597

DREB

RcERF057

RchiOBHm_Chr3g0468481

3

14.49

8

9

1026

342

AP2

RcERF058

RchiOBHm_Chr3g0472281

3

18.19

0

1

615

205

DREB

RcERF059

RchiOBHm_Chr3g0472361

3

18.24

0

1

600

200

DREB

RcERF060

RchiOBHm_Chr3g0480891

3

26.82

5

6

1212

404

AP2

RcERF061

RchiOBHm_Chr3g0481251

3

27.33

0

1

1047

349

DREB

RcERF062

RchiOBHm_Chr3g0482661

3

28.70

8

9

1275

425

AP2

RcERF063

RchiOBHm_Chr4g0392461

4

7.95

0

1

468

156

ERF

RcERF064

RchiOBHm_Chr4g0392501

4

7.98

0

1

804

268

ERF

RcERF065

RchiOBHm_Chr4g0401791

4

20.05

0

1

918

306

ERF

RcERF066

RchiOBHm_Chr4g0401801

4

20.08

8

9

1659

553

AP2

RcERF067

RchiOBHm_Chr4g0405371

4

25.78

6

7

1098

366

AP2

RcERF068

RchiOBHm_Chr4g0415231

4

39.84

0

1

1206

402

ERF

RcERF069

RchiOBHm_Chr4g0421551

4

47.20

1

2

1209

403

ERF

RcERF070

RchiOBHm_Chr4g0423581

4

49.24

1

2

765

255

ERF

RcERF071

RchiOBHm_Chr4g0428551

4

53.58

0

1

813

271

ERF

RcERF072

RchiOBHm_Chr4g0428891

4

53.79

1

2

708

236

ERF

RcERF073

RchiOBHm_Chr4g0433071

4

57.25

0

1

1284

428

ERF

RcERF074

RchiOBHm_Chr4g0435261

4

58.89

1

1

1041

347

DREB

RcERF075

RchiOBHm_Chr4g0435771

4

59.21

0

1

1098

366

RAV

RcERF076

RchiOBHm_Chr4g0440541

4

62.65

5

6

1299

433

AP2

RcERF077

RchiOBHm_Chr5g0008991

5

5.94

0

1

792

264

ERF

RcERF078

RchiOBHm_Chr5g0009711

5

6.43

0

1

510

170

ERF

RcERF079

RchiOBHm_Chr5g0009741

5

6.45

0

1

804

268

ERF

RcERF080

RchiOBHm_Chr5g0032721

5

26.47

0

1

750

250

ERF

RcERF081

RchiOBHm_Chr5g0041261

5

36.01

0

1

678

226

ERF

RcERF082

RchiOBHm_Chr5g0046591

5

42.67

0

1

1098

366

RAV

RcERF083

RchiOBHm_Chr5g0061501

5

67.00

5

6

855

285

AP2

RcERF084

RchiOBHm_Chr5g0073531

5

79.54

0

1

798

266

ERF

RcERF085

RchiOBHm_Chr5g0077201

5

83.01

7

8

1659

553

AP2

RcERF086

RchiOBHm_Chr5g0080541

5

86.52

0

1

1095

365

RAV

RcERF087

RchiOBHm_Chr5g0083271

5

88.95

0

1

846

282

ERF

RcERF088

RchiOBHm_Chr6g0257181

6

12.45

0

1

804

268

ERF

RcERF089

RchiOBHm_Chr6g0274591

6

36.05

1

2

1353

451

ERF

RcERF090

RchiOBHm_Chr6g0276671

6

38.87

0

1

969

323

ERF

RcERF091

RchiOBHm_Chr6g0284081

6

47.38

6

6

669

223

Soloist

RcERF092

RchiOBHm_Chr6g0288231

6

51.49

0

1

789

263

ERF

RcERF093

RchiOBHm_Chr6g0288241

6

51.53

0

1

450

150

ERF

RcERF094

RchiOBHm_Chr6g0288261

6

51.55

0

1

522

174

ERF

RcERF095

RchiOBHm_Chr6g0288271

6

51.55

0

1

450

150

ERF

RcERF096

RchiOBHm_Chr6g0288281

6

51.55

0

1

477

159

ERF

RcERF097

RchiOBHm_Chr6g0289271

6

52.38

0

1

636

212

ERF

RcERF098

RchiOBHm_Chr6g0294441

6

56.77

1

2

927

309

ERF

RcERF099

RchiOBHm_Chr6g0295481

6

57.48

0

1

702

234

DREB

RcERF100

RchiOBHm_Chr6g0298011

6

59.58

1

2

684

228

DREB

RcERF101

RchiOBHm_Chr6g0299771

6

60.81

1

2

618

206

DREB

RcERF102

RchiOBHm_Chr6g0301981

6

62.18

0

1

771

257

DREB

RcERF103

RchiOBHm_Chr6g0306191

6

64.95

0

1

747

249

DREB

RcERF104

RchiOBHm_Chr6g0308371

6

66.49

1

1

468

156

DREB

RcERF105

RchiOBHm_Chr6g0310091

6

67.50

8

9

1971

657

AP2

RcERF106

RchiOBHm_Chr7g0184251

7

4.91

0

1

642

214

ERF

RcERF107

RchiOBHm_Chr7g0185311

7

5.49

3

2

1143

381

DREB

RcERF108

RchiOBHm_Chr7g0187951

7

7.65

0

1

975

325

ERF

RcERF109

RchiOBHm_Chr7g0188681

7

8.08

1

2

798

266

ERF

RcERF110

RchiOBHm_Chr7g0188691

7

8.09

1

2

711

237

ERF

RcERF111

RchiOBHm_Chr7g0195031

7

13.00

0

1

561

187

ERF

RcERF112

RchiOBHm_Chr7g0195581

7

13.38

0

1

1005

335

ERF

RcERF113

RchiOBHm_Chr7g0195661

7

13.46

12

9

1464

488

Soloist

RcERF114

RchiOBHm_Chr7g0199231

7

17.30

0

1

840

280

DREB

RcERF115

RchiOBHm_Chr7g0199251

7

17.32

0

1

723

241

DREB

RcERF116

RchiOBHm_Chr7g0199301

7

17.34

0

1

720

240

DREB

RcERF117

RchiOBHm_Chr7g0199331

7

17.37

0

1

723

241

DREB

RcERF118

RchiOBHm_Chr7g0199351

7

17.38

0

1

753

251

DREB

RcERF119

RchiOBHm_Chr7g0199381

7

17.42

0

1

726

242

DREB

RcERF120

RchiOBHm_Chr7g0203971

7

21.55

0

1

669

223

DREB

RcERF121

RchiOBHm_Chr7g0204031

7

21.62

0

1

537

179

DREB

RcERF122

RchiOBHm_Chr7g0204611

7

22.29

0

1

1023

341

ERF

RcERF123

RchiOBHm_Chr7g0204641

7

22.33

1

2

876

292

ERF

RcERF124

RchiOBHm_Chr7g0230931

7

54.58

1

2

561

187

DREB

RcERF125

RchiOBHm_Chr7g0231481

7

55.10

0

1

498

166

DREB

RcERF126

RchiOBHm_Chr7g0231501

7

55.11

0

1

498

166

DREB

RcERF127

RchiOBHm_Chr7g0231631

7

55.25

0

1

588

196

DREB

RcERF128

RchiOBHm_Chr7g0231641

7

55.30

0

1

582

194

DREB

RcERF129

RchiOBHm_Chr7g0231921

7

55.76

0

1

582

194

DREB

RcERF130

RchiOBHm_Chr7g0235201

7

59.94

0

1

552

184

DREB

RcERF131

RchiOBHm_Chr7g0239701

7

65.48

0

1

1131

377

ERF

  1. aAvailable at https://lipm-browsers.toulouse.inra.fr/pub/RchiOBHm-V2/
  2. bChromosome
  3. cStarting position (Mb)
  4. dAmino Acids
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BMC Plant Biology

ISSN: 1471-2229

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