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Table 1 Physical and chemical characteristics of the 36 Hsf genes identified in Cucurbita moschata

From: Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata)

Gene ID

Gene name

Cmo_Chr a

Startb

Endc

ORF length

(bp)

AAd

pIe

Mwf (Da)

Locg

CmoCh01G018910.1

CmHsf01

01

13,630,401

13,636,203

1701

565

7.32

63,908.05

Nucleus.

CmoCh02G000520.1

CmHsf02

02

279,098

280,430

945

313

6.23

35,866.58

Nucleus.

CmoCh02G015130.1

CmHsf03

02

8,829,467

8,831,346

1017

337

4.79

37,042.37

Nucleus.

CmoCh03G000560.1

CmHsf04

03

917,233

919,195

723

239

9.35

27,525.06

Nucleus.

CmoCh03G009950.1

CmHsf05

03

7,477,236

7,479,691

900

298

5.6

33,388.41

Nucleus.

CmoCh03G012560.1

CmHsf06

03

9,632,303

9,635,635

1392

462

7.55

52,807.71

Nucleus.

CmoCh04G000850.1

CmHsf07

04

461,682

465,859

1218

404

4.88

46,844.9

Nucleus.

CmoCh04G011130.1

CmHsf08

04

5,675,420

5,678,524

1134

376

4.95

43,681.38

Nucleus.

CmoCh05G000960.1

CmHsf09

05

393,383

395,093

1110

368

4.93

41,839.89

Nucleus.

CmoCh05G001750.1

CmHsf10

05

759,147

761,562

1362

452

7.64

50,399.85

Nucleus.

CmoCh05G013450.1

CmHsf11

05

10,456,658

10,458,207

993

329

6.12

37,483.5

Nucleus.

CmoCh05G014000.1

CmHsf12

05

10,787,694

10,799,787

3714

1236

6.8

139,325.5

Cell membrane. Cytoplasm. Nucleus.

CmoCh06G004420.1

CmHsf13

06

2,118,798

2,130,108

4380

1458

5.55

161,555.42

Nucleus.

CmoCh06G006450.1

CmHsf14

06

3,242,367

3,246,508

1566

520

5.12

57,039.44

Nucleus.

CmoCh06G009230.1

CmHsf15

06

6,678,383

6,679,150

687

227

8.85

26,518.21

Nucleus.

CmoCh06G012330.1

CmHsf16

06

9,329,887

9,333,367

1416

470

6.48

52,376.05

Nucleus.

CmoCh06G013840.1

CmHsf17

06

10,166,157

10,173,534

1650

548

5.35

64,159.97

Cell membrane. Cytoplasm. Nucleus.

CmoCh07G001570.1

CmHsf18

07

853,089

854,975

1227

407

5.45

46,937.23

Nucleus.

CmoCh07G002420.1

CmHsf19

07

1,191,784

1,192,862

579

191

8.38

22,514.5

Nucleus.

CmoCh07G007220.1

CmHsf20

07

3,258,238

3,259,253

873

289

6.36

32,815.78

Nucleus.

CmoCh09G002330.1

CmHsf21

09

1,070,417

1,071,523

993

329

8.56

37,629.07

Nucleus.

CmoCh10G006520.1

CmHsf22

10

2,987,379

2,988,593

855

283

6.07

32,230.65

Nucleus.

CmoCh10G009220.1

CmHsf23

10

4,574,443

4,576,160

750

248

8.75

28,527.16

Nucleus.

CmoCh13G006110.1

CmHsf24

11

6,682,088

6,683,686

1239

411

5.21

46,658.15

Nucleus.

CmoCh11G009050.1

CmHsf25

11

4,658,284

4,659,725

708

234

7.96

27,047.37

Nucleus.

CmoCh12G005810.1

CmHsf26

12

3,595,429

3,596,964

1074

356

4.88

40,558.39

Nucleus.

CmoCh11G006110.1

CmHsf27

13

2,932,186

2,933,416

879

291

5.61

33,180.33

Nucleus.

CmoCh14G002670.1

CmHsf28

14

1,203,588

1,210,628

2073

689

5.78

76,886.63

Nucleus.

CmoCh14G017830.1

CmHsf29

14

13,739,183

13,747,848

2604

866

5.34

97,900.69

Nucleus.

CmoCh14G019680.1

CmHsf30

14

14,515,610

14,518,497

1350

448

6.53

50,396.1

Nucleus.

CmoCh15G012680.1

CmHsf31

15

8,690,633

8,692,333

1059

351

4.64

39,145.25

Nucleus.

CmoCh16G001410.1

CmHsf32

16

644,769

646,828

543

179

8.42

20,564.2

Nucleus.

CmoCh16G012250.1

CmHsf33

16

8,775,979

8,782,264

1572

522

4.9

57,215.79

Nucleus.

CmoCh17G011810.1

CmHsf34

17

9,496,232

9,498,290

1140

378

4.9

43,615.67

Nucleus.

CmoCh18G012590.1

CmHsf35

18

12,324,683

12,328,013

1059

351

5.77

39,472.8

Nucleus.

CmoCh19G000190.1

CmHsf36

19

124,488

127,854

1164

386

5.78

44,382.64

Nucleus.

  1. Note: Information on including their chromosomal distribution, their start and the end positions on the chromosomes, nucleic acid sequence and amino acid sequence were extracted from Cucurbit genomics database, and all the data in the table is predicted or theoretical
  2. a Cmo_Chr,The name of the CmHsf chromosome corresponding to the gene
  3. b Start, Predicted starting position of mRNA
  4. c End, Predicted termination position of mRNA
  5. d AA, Amino acid number in CmHsf protein sequences
  6. e pI, Theoretical Isoelectric point
  7. f MW, Molecular weight (Mw) predicted by ExPASy (http://web.expasy.org/tools/)
  8. g Loc, Subcellular location of the CmHsf proteins predicted by Plant-mPLoc