Table 1 The information of differentially expressed miRNAs in pitaya
From: Integrated sRNAome and RNA-Seq analysis reveals miRNA effects on betalain biosynthesis in pitaya
miRNA names | miRNA sequences | Pvalue (ANOVA) | Hp19d (norm) | Hp25d (norm) | Hp29d (norm) |
|---|---|---|---|---|---|
Hmo-MIR2916-p5 | TACCGTCCTAGTCTCAACCATA | 2.99E-07 | 807 | 141 | 2298 |
Hmo-miR171c | TTGAGCCGCGCCAATATCACC | 1.97E-05 | 156 | 72 | 39 |
Hmo-MIR2916-p3 | CAGGGATCGGCGGATGTTGCT | 1.38E-04 | 2332 | 738 | 3765 |
Hmo-miR408 | TTGCACTGCCTCTTCCCTGGC | 5.14E-04 | 682 | 103 | 68 |
Hmo-miR396b | CGGTTCAATAAAGCTGTGGGA | 8.78E-04 | 193 | 334 | 332 |
Hmo-miR393 | TCCAAAGGGATCGCATTGATCC | 1.98E-03 | 697 | 560 | 405 |
Hmo-miR164b | CATGTGCCTGTCTTCCCCATC | 2.20E-03 | 1852 | 7112 | 24,055 |
Hmo-miR398c | TGTGTTCTCAGGTCGCCCCTG | 2.58E-03 | 650 | 136 | 66 |
Hmo-miR390a | CGCTATCCATCCTGAGTTTCA | 2.75E-03 | 187 | 57 | 85 |
Hmo-miR168a | GATCCCGCCTTGCATCAATTGAAT | 3.04E-03 | 193 | 139 | 102 |
Hmo-miR529b | AGAAGAGGGAGAGTACAGCT | 3.81E-03 | 1970 | 853 | 572 |
Hmo-miR398b | TGTGTTCTCAGGTCGCCCC | 4.13E-03 | 89 | 11 | 7 |
Hmo-miR164a | TGGAGAAGCAGGGCACGTGCA | 4.28E-03 | 4479 | 27,331 | 89,762 |
Hmo-novel-7 | TTACTTGGCACTTACGACAGA | 4.32E-03 | 29 | 63 | 59 |
Hmo-miR399a | CGCCAAAGGAGAGTTGCCCTT | 4.40E-03 | 4 | 10 | 18 |
Hmo-miR8175 | GTTCGATCCCCGGCAACGGCGCCA | 4.40E-03 | 33 | 7 | 4 |
Hmo-miR156 | TTGCCAGAAGAGAGTGAGCAC | 6.04E-03 | 30 | 65 | 75 |
Hmo-miR6149a | TTGATACGCACCTGAATCGGC | 6.08E-03 | 38 | 7 | 10 |
Hmo-miR172a | CGAATCTTGATGATGCTGCAT | 7.33E-03 | 461 | 369 | 227 |
Hmo-miR397b | TTGAGTGCAGCGTTGATGAAAT | 7.48E-03 | 31 | 5 | 1 |
Hmo-miR535 | TGACAACGAGAGAGAGCACGC | 8.93E-03 | 3907 | 10,306 | 9059 |
Hmo-miR159b | GGCTTGGATTGAAGGGAGCTCC | 1.17E-02 | 20 | 7 | 9 |
Hmo-miR159a | TTTGGATTGAAGGGAGCTCTA | 1.20E-02 | 198 | 182 | 108 |
Hmo-miR530 | TGCATTTGCACCTGCACCTGA | 1.71E-02 | 15 | 5 | 8 |
Hmo-miR6300 | GTCGTTGTAGTATAGTGG | 1.80E-02 | 2638 | 88 | 161 |
Hmo-novel-21 | ACGCCTAATGCTGTGTATGGGAGG | 1.90E-02 | 179 | 222 | 118 |
Hmo-miR390b | AAGCTCAGGAGGGATAGCGCC | 1.91E-02 | 29 | 5 | 6 |
Hmo-miR398a | TGTGTTCTCAGGTCACCCCTT | 1.93E-02 | 64 | 27 | 25 |
Hmo-novel-2 | CAGCTTTCTTGAACTTTCCCC | 2.23E-02 | 566 | 501 | 773 |
Hmo-miR394 | TGGGCATTCTGTCCACCTCC | 2.38E-02 | 6 | 2 | 2 |
Hmo-miR157b | CTGCCAGAAGATAGAGAGCAC | 2.38E-02 | 50 | 105 | 148 |
Hmo-miR6020 | AAATGTTCTTCGAGTATCTTC | 2.51E-02 | 5 | 0 | 1 |
Hmo-miR160b | TGCCTGGCTCCCTGTATGCCG | 2.89E-02 | 164 | 189 | 76 |
Hmo-miR5072 | TCCCCAGTGGAGTCGCCA | 2.95E-02 | 21 | 2 | 3 |
Hmo-novel-15 | TCGCGCCTCGGGACCCTTTGC | 2.99E-02 | 48 | 31 | 32 |
Hmo-novel-12 | AGAGAAAGCATAAGCAACTGT | 3.28E-02 | 0 | 8 | 6 |
Hmo-miR171d | TTGAGCCGTGCCAATATCCCA | 4.38E-02 | 9 | 2 | 3 |
Hmo-miR482f | GGTATTGGTGGGTTGGAAAGC | 4.88E-02 | 2 | 0 | 0 |