Fig. 4
The RTM-GWAS results and haplotype analysis of LP. a Manhattan (left) and quantile–quantile plots (right) of LP. b Distribution of allele effect of the significant SNPLDB loci for LP. The number 2–6 indicate respectively the five significant SNPLDB loci LDB_2_98957055_98957100, LDB_20_52488458, LDB_19_62926589, LDB_15_33683466_33683486, and LDB_6_87041656_87041922. c-g The LP differences of the five stable SNPLDB loci among different haplotypes/alleles. c LDB_2_98,957,055_98957100, Hap1(CCAA), Hap2(CTAG) and Hap3(TTGG); d LDB_20_52488458, Allele1–3 represent AA, AG and GG, respectively; e LDB_19_62926589, Allele1–3 represent CC, CT and TT, respectively. f LDB_15_33683466_33683486, Hap1(CCCC), Hap2 (CTCT), Hap3(TTTT); g LDB_6_87041656_87041922, Hap1(CCAATT), Hap2 (CCGGCC), Hap3(CTAATT), Hap4(CTAGCT) and Hap5(TTAATT)