Genome-wide association studies of ionomic and agronomic traits in USDA mini core collection of rice and comparative analyses of different mapping methods

Table 1 Summary of the SNPs across 12 chromosomes of Oryza sativa

Chromosome	Number of SNPs	Length of Chromosome (bp)	Density of SNP (bp/SNP)
1	375,296	43,270,923	115.30
2	301,111	35,937,250	119.35
3	294,312	36,413,819	123.73
4	279,049	35,502,694	127.23
5	253,001	29,958,434	118.41
6	287,238	31,248,787	108.79
7	253,651	29,697,621	117.08
8	261,070	28,443,022	108.95
9	212,238	23,012,720	108.43
10	222,521	23,207,287	104.29
11	289,053	29,021,106	100.40
12	230,938	27,531,856	119.22
Total	3,259,478	373,245,519	114.51

ISSN: 1471-2229