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Table 1 Summary of the SNPs across 12 chromosomes of Oryza sativa

From: Genome-wide association studies of ionomic and agronomic traits in USDA mini core collection of rice and comparative analyses of different mapping methods

Chromosome Number of SNPs Length of Chromosome (bp) Density of SNP (bp/SNP)
1 375,296 43,270,923 115.30
2 301,111 35,937,250 119.35
3 294,312 36,413,819 123.73
4 279,049 35,502,694 127.23
5 253,001 29,958,434 118.41
6 287,238 31,248,787 108.79
7 253,651 29,697,621 117.08
8 261,070 28,443,022 108.95
9 212,238 23,012,720 108.43
10 222,521 23,207,287 104.29
11 289,053 29,021,106 100.40
12 230,938 27,531,856 119.22
Total 3,259,478 373,245,519 114.51