Fig. 3

Screenshot of the Table page. Selecting OSR genes on the Search page (a) creates a row in the table (b). Displayed on each row is the OSR gene name, the chromosome and chromosome position where the gene is located, and if applicable, details about the degree of sequence conservation between the homologous gene searched for and the OSR gene selected. Additional sequence similarity information can be accessed by clicking the + symbol on the left of the table. Due to the many-to-many mapping of OSR genes to homologous genes, a colour code is used. In this case, the user has searched for OSR genes exhibiting homology to the Arabidopsis gene FLC, and specifically, to the splice isoform AT5G10140.4. The OSR gene XLOC_010191 shows highest sequence conservation to AT5G10140.4, and is coloured green. XLOC_026893, however, shows greatest sequence similarity to the Arabidopsis gene MADS AFFECTING FLOWERING 4 (MAF4), rather than FLC, and is coloured white. Genes that are coloured yellow display greatest similarity to the gene searched for, although to a different splice isoform than the one the user searched for. In the case of XLOC_067036, it is most similar to the FLC splice isoform AT5G10140.1. Dashed lines in (b) indicate that table rows have been omitted for clarity