Table 1 List of the 76 tobacco aquaporin genes identified in this study
This study | TN90 - Sierro et al., 2014 | K326 - Edwards et al., 2017 | ||||
|---|---|---|---|---|---|---|
Gene ID | Protein (aa) | NCBI accession - This study | Gene ID(1) | Accurate gene model?(1) | Gene ID(2) | Accurate gene model?(2) |
NtPIP1;1s | 289 | BK011392 | gene_35182 | Y | Nitab4.5_0004836g0030.1 | N |
NtPIP1;1t | 289 | BK011393 | gene_27714 | Y | Nitab4.5_0006090g0020.1 | N |
NtPIP1;2s | 288 | BK011394 | gene_58674 | Y | Nitab4.5_0011459g0010.1 | Y |
NtPIP1;2t | 286 | BK011395 | gene_10991 | N | Nitab4.5_0000583g0150.1 | Y |
NtPIP1;3s | 288 | BK011396 | gene_79275 | Y | Nitab4.5_0007597g0010.1 | Y |
NtPIP1;3t | 288 | BK011397 | gene_84661 | Y | Nitab4.5_0003043g0010.1 | Y |
NtPIP1;5s | 288 | BK011398 | gene_40739 | Y | Nitab4.5_0010813g0020.1 | N |
NtPIP1;5t | 288 | BK011399 | gene_80239 | Y | Nitab4.5_0001615g0140.1 | Y |
NtPIP1;7s | 287 | BK011400 | gene_59749 | Y | Nitab4.5_0006718g0030.1 | N |
NtPIP1;8s | 286 | BK011401 | gene_86041 | Y | Nitab4.5_0000737g0120.1 | Y |
NtPIP2;1s | 284 | BK011402 | gene_9798 | Y | Nitab4.5_0009795g0020.1 | Y |
NtPIP2;1x | 284 | BK011403 | gene_9795 | N | Nitab4.5_0009795g0010.1 | N |
NtPIP2;2t | 284 | BK011404 | gene_87071 | Y | Nitab4.5_0000101g0110.1 | Y |
NtPIP2;3t | 284 | BK011405 | gene_8898 | N | Nitab4.5_0000101g0120.1 | N |
NtPIP2;4s | 288 | BK011406 | gene_84258 | Y | Nitab4.5_0004314g0010.1 | Y |
NtPIP2;4t | 288 | BK011407 | gene_71307 | Y | Nitab4.5_0000181g0120.1 | N |
NtPIP2;5s | 286 | BK011408 | gene_31592 | Y | Nitab4.5_0001192g0080.1 | N |
NtPIP2;5t | 286 | BK011409 | gene_32945 | Y | Nitab4.5_0001297g0050.1 | N |
NtPIP2;6s | 288 | BK011410 | gene_22735 | Y | Nitab4.5_0004108g0020.1 | Y |
NtPIP2;6t | 288 | BK011411 | gene_34319 | Y | Nitab4.5_0000650g0260.1 | Y |
NtPIP2;7t | 284 | BK011412 | gene_84225 | Y | Nitab4.5_0000106g0170.1 | Y |
NtPIP2;8s | 285 | BK011413 | gene_75147 | Y | Nitab4.5_0003914g0040.1 | Y |
NtPIP2;8t | 285 | BK011414 | gene_53392 | Y | Nitab4.5_0000283g0420.1 | Y |
NtPIP2;9s | 284 | BK011415 | gene_84936 | Y | Nitab4.5_0005236g0020.1 | N |
NtPIP2;9t | 284 | BK011416 | gene_9787 | N | Nitab4.5_0002763g0030.1 | N |
NtPIP2;11s | 269 | BK011417 | gene_40272 | Y | Nitab4.5_0008552g0040.1 | N |
NtPIP2;11t | 269 | BK011418 | gene_62966 | Y | Nitab4.5_0001789g0070.1 | N |
NtPIP2;13s | 284 | BK011419 | gene_55607 | Y | Nitab4.5_0014443g0010.1 | Y |
NtPIP2;13t | 284 | BK011420 | gene_81728 | Y | Nitab4.5_0000575g0130.1 | Y |
NtNIP1;1s | 275 | BK011376 | gene_27146 | N | Nitab4.5_0005428g0060.1 | N |
NtNIP1;2s | 288 | BK011377 | gene_42864 | Y | Nitab4.5_0008572g0060.1 | N |
NtNIP1;2t | 282 | BK011378 | gene_42851 | N | Nitab4.5_0001778g0110.1 | Y |
NtNIP2;1s | 287 | BK011379 | gene_24518 | Y | Nitab4.5_0001638g0020.1 | N |
NtNIP3;1s | 348 | BK011380 | gene_85282 | Y | Nitab4.5_0013395g0010.1 | N |
NtNIP4;1s | 271 | BK011381 | gene_11802 | Y | Nitab4.5_0003360g0080.1 | N |
NtNIP4;1t | 272 | BK011382 | gene_33173 | Y | Nitab4.5_0004399g0020.1 | N |
NtNIP4;2s | 273 | BK011383 | gene_47152 | Y | Not identified | - |
NtNIP4;2t | 273 | BK011384 | gene_36231 | Y | Nitab4.5_0000742g0130.1 | N |
NtNIP4;3s | 282 | BK011385 | gene_55126 | Y | Not identified | - |
NtNIP5;1s | 298 | BK011386 | gene_36225 | Y | Nitab4.5_0005519g0010.1 | N |
NtNIP5;1t | 298 | BK011387 | gene_38118 | Y | Nitab4.5_0000799g0080.1 | Y |
NtNIP6;1s | 304 | BK011388 | gene_39457 | N | Nitab4.5_0012943g0030.1 | Y |
NtNIP6;1t | 304 | BK011389 | gene_8958 | N | Nitab4.5_0001454g0120.1 | N |
NtNIP7;1s | 294 | BK011390 | gene_69139 | Y | Nitab4.5_0007039g0010.1 | N |
NtNIP7;1t | 281 | BK011391 | gene_41519 | Y | Nitab4.5_0002600g0020.1 | N |
NtTIP1;1s | 252 | BK011426 | gene_4702 | Y | Nitab4.5_0003155g0010.1 | N |
NtTIP1;1t | 252 | BK011427 | gene_17915 | Y | Nitab4.5_0001163g0070.1 | N |
NtTIP1;2s | 253 | BK011428 | gene_62289 | Y | Nitab4.5_0001068g0010.1 | Y |
NtTIP1;2t | 253 | BK011429 | gene_18091 | Y | Nitab4.5_0000766g0050.1 | Y |
NtTIP1;3t | 249 | BK011430 | gene_34364 | Y | Nitab4.5_0022765g0010.1 | Y |
NtTIP1;3s | 249 | BK011431 | gene_81216 | Y | Nitab4.5_0011193g0010.1 | Y |
NtTIP1;4t | 252 | BK011432 | gene_44062 | Y | Nitab4.5_0000173g0030.1 | N |
NtTIP2;1s | 249 | BK011433 | gene_13886 | N | Nitab4.5_0009267g0020.1 | N |
NtTIP2;1t | 249 | BK011434 | gene_84779 | Y | Nitab4.5_0003039g0050.1 | N |
NtTIP2;2s | 251 | BK011435 | gene_65205 | Y | Nitab4.5_0001381g0190.1 | N |
NtTIP2;3s | 251 | BK011436 | gene_8782 | Y | Nitab4.5_0001076g0030.1 | N |
NtTIP2;3t | 251 | BK011437 | gene_77281 | Y | Nitab4.5_0000618g0070.1 | N |
NtTIP2;4s | 249 | BK011438 | gene_44575 | Y | Nitab4.5_0007573g0030.1 | Y |
NtTIP2;5s | 249 | BK011439 | gene_55803 | Y | Not identified | - |
NtTIP2;5t | 249 | BK011440 | gene_36783 | Y | Nitab4.5_0011578g0040.1 | N |
NtTIP3;1s | 260 | BK011441 | gene_7183 | Y | Nitab4.5_0005315g0010.1 | Y |
NtTIP3;1t | 260 | BK011442 | gene_54243 | Y | Nitab4.5_0000477g0090.1 | Y |
NtTIP3;2t | 259 | BK011443 | gene_79868 | N | Nitab4.5_0009307g0020.1 | Y |
NtTIP4;1s | 248 | BK011444 | gene_76645 | Y | Nitab4.5_0000837g0080.1 | N |
NtTIP4;1t | 248 | BK011445 | gene_2305 | Y | Nitab4.5_0000151g0360.1 | Y |
NtTIP5;1s | 251 | BK011446 | gene_8008 | Y | Nitab4.5_0010023g0020.1 | Y |
NtTIP5;1t | 251 | BK011447 | gene_33209 | Y | Nitab4.5_0002816g0050.1 | N |
NtSIP1;1t | 238 | BK011421 | gene_54009 | N | Nitab4.5_0000001g0350.1 | Y |
NtSIP1;2s | 244 | BK011422 | gene_73217 | Y | Nitab4.5_0007223g0030.1 | Y |
NtSIP1;2t | 243 | BK011423 | gene_74850 | Y | Nitab4.5_0000812g0160.1 | N |
NtSIP2;1s | 241 | BK011424 | gene_42066 | Y | Nitab4.5_0001918g0070.1 | N |
NtSIP2;1t | 241 | BK011425 | gene_29131 | N | Nitab4.5_0000721g0170.1 | Y |
NtXIP1;6s | 327 | BK011448 | gene_13292 | Y | Nitab4.5_0007293g0050.1 | N |
NtXIP1;6t | 327 | BK011449 | gene_52652 | Y | Nitab4.5_0000956g0150.1 | N |
NtXIP1;7s | 314 | BK011450 | gene_34706 | Y | Nitab4.5_0007733g0020.1 | N |
NtXIP1;7t | 314 | BK011451 | gene_50247 | Y | Nitab4.5_0006828g0010.1 | N |