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Table 4 KEGG pathway enrichment of 1209 DEGs

From: Transcriptome analysis reveals the defense mechanism of cotton against Verticillium dahliae in the presence of the biocontrol fungus Chaetomium globosum CEF-082

Pathway ID Pathway Number of DEGs P-value Q-value
ko00941 Flavonoid biosynthesis 19 0.000016 0.002007
ko00901 Indole alkaloid biosynthesis 14 0.000042 0.002610
ko04016 MAPK signalling pathway - plant 60 0.000474 0.019427
ko04626 Plant-pathogen interaction 59 0.001099 0.033788
ko00940 Phenylpropanoid biosynthesis 34 0.001932 0.047538
  1. Pathways with a Q-value < 0.05 are shown