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Table 1 Identification of putative F3’H genes in cereal plants. The F3’H class was classified based on the phylogeny analyses. The gene duplication pattern was determined using the MCScanX tool. NA stands for “not applicable”

From: Evolutionary dynamic analyses on monocot flavonoid 3′-hydroxylase gene family reveal evidence of plant-environment interaction

Species Chr F3’H gene ID F3’H class Duplication pattern Start position End position
Triticeae H. vulgare 1H HORVU1Hr1G094880 Class I Dispersed duplication 556,691,949 556,693,904
6H HORVU6Hr1G002400 Class II Dispersed duplication 6,328,532 6,330,799
7H HORVU7Hr1G095900.47 Class II Dispersed duplication 585,061,615 585,071,468
A. tauschiii Aet1 AET1Gv21041800 Class I Dispersed duplication 499,122,364 499,126,756
Aet6 AET6Gv20027200 Class II Dispersed duplication 5,657,246 5,659,238
Aet7 AET7Gv20999800 Class II Dispersed duplication 523,485,446 523,487,617
T. turgidum Tt1A TRIDC1AG064860 Class I NA 590,437,663 590,440,408
Tt1B TRIDC1BG074020 Class I 685,939,174 685,944,027
Tt2B TRIDC2BG088640 Class I 792,785,227 792,787,184
Tt6A TRIDC6AG001340 Class II 4,624,395 4,644,086
Tt6B TRIDC6BG002010 Class II 11,399,578 11,402,254
Tt7A TRIDC7AG057400 Class II 599,327,799 599,328,465
Tt7B TRIDC7BG049820 Class II 562,791,603 562,792,604
T. aestivum Ta1A TraesCS1A01G442300.1 Class I NA 590,995,642 590,997,413
Ta1B TraesCS1B01G476400.1 Class I 685,231,562 685,233,491
Ta1D TraesCS1D01G450100.1 Class I 492,534,241 492,538,011
Ta2B TraesCS2B01G613200.1 Class I 792,677,476 792,679,409
Ta6A TraesCS6A01G012600.1 Class II 5,861,572 5,863,417
Ta6B TraesCS6B01G018800.1 Class I 11,574,703 11,578,097
Ta6D TraesCS6D01G015200.1 Class II 6,319,419 6,321,226
Ta7A TraesCS7A01G411700.1 Class II 602,804,667 602,806,415
Ta7D TraesCS7D01G404900.1 Class II 522,502,518 522,504,208
S. cereale Sc1 Sc1Loc01465431 Class I NA Lo7_v2_contig_2871825
Sc2 Sc2Loc01684522 Class I Lo7_v2_contig_326626
Sc7 Sc7Loc01952123 Class II Lo7_v2_contig_61986
T. urartu Tu1 TuG1812G0100004862 Class I Dispersed duplication 581,402,997 581,404,997
Tu7 TuG1812G0700004460 Class II Dispersed duplication 590,301,744 590,303,739
  B. distachyon Bd1 Bradi1g17180 Class I Dispersed duplication 13,787,434 13,789,806
Bd1 Bradi1g24840 Class II Dispersed duplication 20,108,563 20,112,348
Bd3 Bradi3g04750 Class I Dispersed duplication 3,260,666 3,262,706
Bd4 Bradi4g16560 Class II Dispersed duplication 17,368,956 17,372,786
  O. sativa indica Os10 LOC_Os10g17260 Class I Proximal duplication 8,679,309 8,681,284
Os10 LOC_Os10g16974 Class II Proximal duplication 8,494,247 8,504,329
Panicoideae Z. mays Zm4 Zm00008a016611 Class I WGD/Segmental 131,908,959 131,910,431
Zm5 Zm00008a022212 Class I WGD/Segmental 177,289,973 177,292,210
Zm8 Zm00008a031477 Class II Dispersed duplication 116,235,840 116,239,418
S. bicolor Sb4 Sobic.004G200800 Class I Tandem duplication 55,221,098 55,224,686
Sb4 Sobic.004G200833 Class I Tandem duplication 55,225,513 55,227,179
Sb4 Sobic.004G200900 Class I Proximal duplication 55,233,582 55,236,702
Sb4 Sobic.004G201100 Class I Proximal duplication 55,261,682 55,264,545
Sb9 Sobic.009G162500 Class II Dispersed duplication 51,943,204 51,948,939
S. italica Si9 Seita.9G244600 Class II Dispersed duplication 19,091,837 19,094,929
Si9 Seita.9G242900 Class I Dispersed duplication 18,990,913 18,992,801
P. hallii Ph8 Pahal.H01052 Class II Dispersed duplication 31,682,928 31,687,178
Ph9 Pahal.I03232 Class I Dispersed duplication 16,748,267 16,750,212