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Table 1 Percentage of transition and transversion SNPs identified using genotyping-by-sequencing

From: Genetic diversity, linkage disequilibrium, and population structure analysis of the tea plant (Camellia sinensis) from an origin center, Guizhou plateau, using genome-wide SNPs developed by genotyping-by-sequencing

  Transitions Transversions
AG CT AT AC CG GT
Numbers of allelic sites 31472 31490 4656 3960 3010 4024
Percentage of allelic sites 39.83% 39.85% 5.89% 5.01% 3.81% 5.09%
Total (Percentage) 62962(79.68%)   15650(19.81%)