Fig. 4
From: Mapping non-host resistance to the stem rust pathogen in an interspecific barberry hybrid
Visualization of synteny of the BtUCONN1 (red) and Wagon Hill (green) genetic maps. Berberis vulgaris (Bv, green) and B. thunbergii (Bt, red) genetic maps (in cM) are anchored to the B. thunbergii cv. ‘Kobold’ reference assembly (Ko, blue; in Mbp) via GBS centroids. The seven GBS markers that BLAST outside their expected linkage groups are indicated by small numbers (01–14) that signify the linkage groups with which they associate. The four GBS markers that BLAST to unscaffolded contigs are indicated by “Un”. Small dots beside linkage maps indicate loci with multiple, ambiguous alignments throughout the genome. Bold horizontal black bars on the Kobold physical map indicate approximate centromere positions, based on the Hi-C heatmap. The position of QTL region QPgr-3S is indicated alongside the chromosome 3 linkage map for the B. thunbergii parent ‘BtUCONN1’