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Table 4 List of DEGs involved in auxin transduction identified via RNA-seq analysis

From: A transcriptome analysis reveals a role for the indole GLS-linked auxin biosynthesis in secondary dormancy in rapeseed (Brassica napus L.)

Gene ID Arabidopsis orthologs Va vs Vb (log2FC) Va vs Ha (log2FC) Function description
BnaA07g28560D IAR4 Up (1.7) Up (1.9) IAA conjugate sensitivity
BnaA09g42140D BnaC08g34560D GH3.3 Down (−2.3/−3.7) Down (−2.3/−3.3) IAA-amido synthase activity
BnaC02g36370D AFB2 Up (1.7) Up (2.6) The dominant auxin receptor
BnaC01g20800D RMA2 Down (−1.5) Down (−2.1) Ubiquitinates Auxin binding protein 1
BnaA10g27350D SSR1 Down (−1.7) Down (−2.6) Auxin polar transport
BnaC02g24140D PILS3 Up (2.8) Up (2.9) Auxin efflux carrier
BnaA04g26870D ABCB4 Up (5.2) Up (2.8) Auxin efflux transporter
BnaA07g19210D ABCB21 Up (3.9) Up (3.2) Auxin efflux transporter
BnaC04g13950D GSTU5 Up (2.3) Up (2.9) Response to auxin
BnaC05g50350D PATL2 Up (3.9) Up (2.1) Response to auxin
BnaC05g23700D PATL4 Up (1.2) Up (1.8) Response to auxin
BnaC08g19040D ARF5 Up (2.3) Up (2.9) Auxin response factor
BnaA05g01310D ARF11 Up (3.4) Up (4.1) Auxin response factor