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Table 7 miRNAs and target genes annotation in Larix olgensis

From: Identification of miRNAs and their target genes in Larix olgensis and verified of differential expression miRNAs

miRNA ID

miRNA

Target gene ID

Target gene annotation

Reference species

conservative_c67876.graph_c0_42013

miR160

c79046.graph_c0

auxin response factor 16

Pinus massoniana

c47433.graph_c0

putative auxin response factor 10/16/17

Cycas rumphii

c67876.graph_c0

hypothetical protein CCACVL1_17746

Corchorus capsularis

conservative_c100220.graph_c0_21

miR164

c82138.graph_c0

Carboxyl transferase

Macleaya cordata

c51789.graph_c0

cup-shaped cotyledon

Picea abies

c100220.graph_c0

ABC transporter ATP-binding protein

Archaeoglobus veneficus

conservative_c81519.graph_c0_113869

miR166–1

c75192.graph_c0

class III HD-Zip protein

Pinus taedas

c81519.graph_c0

unknown

Picea sitchensis

conservative_c101915.graph_c0_183

miR166–2

c101915.graph_c0

DEAD/DEAH box helicase

Pedobacter sp. KBW06

conservative_c53169.graph_c0_14321

miR396–1

c53169.graph_c0;

c76194.graph_c0;

c84439.graph_c0;

No

 

c80217.graph_c0

hypothetical protein COLO4

Corchorus olitorius

conservative_c84439.graph_c0_145702

miR396–2

c76194.graph_c0;

c84439.graph_c0

No

 

c85259.graph_c0

mannitol dehydrogenase

Glonium stellatum

c75801.graph_c0

unnamed protein product

Arabidopsis halleri

conservative_c79262.graph_c0_97269

miR950–1

c72897.graph_c0;

c83878.graph_c0;

c79262.graph_c0;

No

 

c70968.graph_c0

unknown

Picea sitchensis

c69006.graph_c0

putative TIR-NBS-LRR protein

Pinus monticola

unconservative_c72897.graph_c0_60887

miR950–2

c60781.graph_c0

unknown

Picea sitchensis

c79262.graph_c0;

c83878.graph_c0;

c72897.graph_c0;

No

 

c83910.graph_c0

NB-ARC

Pinus tabuliformis

c79134.graph_c0

putative TIR-NBS-LRR protein

Pinus monticola

  1. Note:target genes annotation was based on other species in Nr, Swissprot, Pfam database. “No” indicated no alignment results