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Table 1 Quality analysis of clean reads of RNA-seq

From: RNA-seq data reveals a coordinated regulation mechanism of multigenes involved in the high accumulation of palmitoleic acid and oil in sea buckthorn berry pulp

Sample Stage Length of read Number of reads Total bases Q20 (%) Q30 (%) GC (%) N (ppm) Mapped (%)
Line Za56 pulp S1 142.36 42,719,700 6,081,446,055 99.33 97.53 41.10 2.24 60.86
S2 139.48 41,463,302 5,783,400,256 99.27 97.21 41.56 3.23 54.84
S3 142.98 43,184,998 6,174,487,450 99.29 97.40 41.48 2.04 64.66
S4 143.46 55,867,418 8,014,903,918 99.53 98.05 41.36 8.45 64.71
Line TF2–36 pulp S1 144.18 48,471,784 6,988,472,233 99.58 98.25 41.80 5.70 66.25
S2 143.69 60,647,368 8,714,191,825 99.57 98.21 41.21 5.81 64.87
S3 143.59 59,674,434 8,568,834,801 99.54 98.08 41.41 4.20 65.35
S4 143.01 45,794,132 6,548,950,087 99.56 98.14 41.35 4.28 63.36