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Table 1 Differentially expressed proteins (DEP) involved in DNA methylation, lipid metabolism, antioxidase system, and sucrose metabolism among the various wheat genotypes

From: An extracted tetraploid wheat harbouring the BBAA component of common wheat shows anomalous shikimate and sucrose metabolism

Gene name Fold change Adjusted P value
AL/ETW TAA10/ETW XX329/ETW AL/ETW TAA10/ETW XX329/ETW
DNA methylation
 Methyl-CpG binding domain 0.14 0.72 0.82 0.001 0.812 0.919
 Methyl-CpG binding domain 1 0.18 0.96 0.64 0.013 1.000 0.620
 Methyl-CpG binding domain 2 0.02 0.02 1.27 0.000 0.000 0.785
Lipid metabolism
 Lipoxygenase 0.02 0.02 5.15 0.000 0.000 0.000
 Lipid transfer protein 0.14 0.20 0.48 0.001 0.000 0.181
 Non-specific lipid-transfer 0.13 0.57 0.42 0.004 0.722 0.179
 Non-specific lipid-transfer 0.15 0.09 0.30 0.044 0.000 0.054
 Lipoxygenase 0.20 0.80 0.78 0.005 0.923 0.813
 Lipoxygenase 0.26 1.74 3.47 0.029 0.125 0.000
 Lipoxygenase 0.18 1.13 0.40 0.030 0.929 0.141
Antioxidase system
 Peroxidase 0.02 0.02 1.32 0.000 0.000 0.768
 Ascorbate peroxidase 0.15 0.44 0.84 0.010 0.315 0.936
 Peroxidase 0.09 0.28 0.47 0.000 0.007 0.231
 Cu-Zn-SOD 0.25 1.49 2.19 0.026 0.361 0.013
 Cu-Zn-SOD 0.18 0.97 1.42 0.001 0.989 0.499
 Glutathione peroxidase 0.25 0.76 0.66 0.027 0.838 0.578
 Glutathione S-transferase 50.00   50.00 0.000   0.000
 Glutathione S-transferase 0.19 1.66 1.14 0.018 0.286 0.823
 Glutathione S-transferase 0.24 0.92 0.81 0.018 0.989 0.869
Sugar metabolism
 Fructose-1,6-bisphosphatase 0.02 4.26 2.27 0.000 0.000 0.008
 Fructose-1,6-bisphosphatase 0.02 4.30 2.57 0.000 0.000 0.005
 Fructose-bisphosphate aldolase 0.02 5.70 4.25 0.000 0.017 0.006
 Galactose-6-phosphate isomerase 0.02 0.02 0.91 0.000 0.000 0.992
 Beta-fructofuranosidase 0.02 0.60 0.70 0.000 0.927 0.882
 Glycosyltransferase 0.02 0.02 0.02 0.000 0.000 0.000
 Glycosyltransferase 9.03 0.02 10.60 0.000 0.000 0.000
 Beta-1,3-glucanase 0.03 0.02 0.06 0.000 0.000 0.000
  1. The wheat genotypes used in this study include: extracted tetraploid wheat (ETW), its common wheat donor (line TAA10, genome BBAADD), a tetraploid wheat line (AL: ALTAR81, genome BBAA), and a resynthesized allohexaploid wheat (XX329, genome BBAADD) obtained by crossing ETW (maternal parent) and TQ18 (paternal parent). Only those proteins that showed at least a twofold difference were considered. Adjusted P values < 0.05. Only DEPs between ETW and AL are listed. Each genotype had four biological replicates, and each biological replicate comprised a pool of five plants