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Table 1 Summary of the transcriptome data in sweet potato roots

From: RNA-Seq and iTRAQ reveal multiple pathways involved in storage root formation and development in sweet potato (Ipomoea batatas L.)

sample Raw reads Clean reads Clean bases Total map Unique map Multi map Splice map
F_1 26,124,764 25,442,025 7.63G 69.24% 65.01% 4.23% 23.53%
F_2 25,889,827 25,359,234 7.61G 69.93% 65.74% 4.19% 23.83%
F_3 25,876,842 25,016,010 7.5G 71.83% 67.42% 4.41% 24.55%
D1_1 22,551,090 21,935,933 6.58G 75.58% 71.04% 4.54% 24.38%
D1_2 28,567,062 28,008,903 8.4G 75.0% 70.35% 4.65% 26.3%
D1_3 26,290,672 25,685,971 7.71G 74.25% 70.05% 4.2% 23.12%
D3_1 24,556,185 23,919,071 7.18G 75.33% 70.85% 4.49% 26.12%
D3_2 25,349,499 24,676,501 7.4G 77.25% 72.28% 4.97% 25.97%
D3_3 25,184,630 24,501,723 7.35G 75.68% 70.92% 4.77% 25.59%
D5_1 28,616,823 27,935,363 8.38G 75.74% 71.38% 4.35% 25.03%
D5_2 26,397,886 25,447,938 7.63G 77.42% 72.16% 5.26% 23.36%
D5_3 23,103,960 22,311,013 6.69G 77.14% 71.65% 5.49% 21.79%
D10_1 25,648,113 25,081,452 7.52G 76.69% 72.1% 4.59% 26.4%
D10_2 27,226,706 26,638,262 7.99G 76.58% 71.78% 4.8% 24.14%
D10_3 25,359,719 24,689,508 7.41G 75.29% 70.95% 4.34% 23.74%