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Table 5 The expression patterns of EIN3/EIL gene pairs with potential direct evolutionary relationships

From: Genome-wide identification and analysis of the EIN3/EIL gene family in allotetraploid Brassica napus reveal its potential advantages during polyploidization

Clade Gene pairs with evolutionary relationship Flowers_FPKM Leaves_FPKM Siliques_FPKM Stems_FPKM Gene structurea
A1 sub-clade BoEIL1 28.80 27.85 32.86 50.47 S
BnAEIL1b 0 0 0 0
B3 sub-clade BrEIL3a 11.38 9.53 7.79 6.19 S
BnAEIL3a 5.37 0.00 4.87 5.02
BoEIL3a 19.85 8.06 15.98 14.05 S
BnCEIL3b 5.36 5.62 5.56 5.16
BrEIL3c 0.31 0.04 0.08 0 D
BnAEIL3d 0.59 0.28 0.48 0.47
BoEIL3b 9.75 3.84 6.78 6.23 D
BnCEIL3c 3.74 4.39 1.93 2.38
C1 sub-clade BrEIL2 0.12 0.09 0.29 0.12 D
BnAEIL2a 0 0 0.06 0.16
BoEIL2b 0.02 0 1.30 0.06 D
BnCEIL2b 0 0 0.02 0.15
C3 sub-clade BrEIL4a 0 0 0 0 S
BnAEIL4b 0 0 0 0
BoEIL4a 0 0 0.03 0.05 S
BnCEIL4a 0 0 0 0
BrEIL4b 0 0 0 0 S
BnAEIL4d 0 0 0 0
BoEIL4b 0.76 0.13 1.11 0.67 S
BnCEIL4c 0 0.08 0.22 0
  1. aGene structure was used to show whether the gene pairs had the same intron/exon structure. S represented they have same gene structure and D represented they have different gene structure