Table 4 Transition and transversion rate of the chloroplast tRNAs. Bold letter indicates transition
From: Genomic and evolutionary aspects of chloroplast tRNA in monocot plants
| Â | A | U | C | G | Â | A | U | C | G |
|---|---|---|---|---|---|---|---|---|---|
Alanine | Lysine | ||||||||
A | – | 8.34 | 8.34 | 8.33 | A | – | 10.09 | 10.09 | 4.82 |
U | 8.34 | – | 8.33 | 8.34 | U | 10.09 | – | 4.82 | 10.09 |
C | 8.34 | 8.33 | – | 8.34 | C | 10.09 | 4.82 | – | 10.09 |
G | 8.33 | 8.34 | 8.34 | – | G | 4.82 | 10.09 | 10.09 | – |
Arginine | Methionine | ||||||||
A | – | 6.3 | 6.3 | 12.40 | A | – | 4.06 | 4.06 | 16.87 |
U | 6.30 | – | 12.40 | 6.30 | U | 4.06 | – | 16.87 | 4.06 |
C | 6.30 | 12.40 | – | 6.30 | C | 4.06 | 16.87 | – | 4.06 |
G | 12.40 | 6.30 | 6.30 | – | G | 16.87 | 4.06 | 4.06 | – |
Asparagine | Phenylalanine | ||||||||
A | – | 8.34 | 8.34 | 8.33 | A | – | 8.34 | 8.34 | 8.33 |
U | 8.34 | – | 8.33 | 8.34 | U | 8.34 | – | 8.33 | 8.34 |
C | 8.34 | 8.33 | – | 8.34 | C | 8.34 | 8.33 | – | 8.34 |
G | 8.33 | 8.34 | 8.34 | – | G | 8.33 | 8.34 | 8.34 | – |
Aspartate | Proline | ||||||||
A | – | 8.34 | 8.34 | 8.33 | A | – | 8.34 | 8.34 | 8.33 |
U | 8.34 | – | 8.33 | 8.34 | U | 8.34 | – | 8.33 | 8.34 |
C | 8.34 | 8.33 | – | 8.34 | C | 8.34 | 8.33 | – | 8.34 |
G | 8.33 | 8.34 | 8.34 | – | G | 8.33 | 8.34 | 8.34 | – |
Cysteine | Serine | ||||||||
A | – | 0.00 | 0.00 | 25.00 | A | – | 9.15 | 9.15 | 6.70 |
U | 0.00 | – | 25.00 | 0.00 | U | 9.15 | – | 6.70 | 9.15 |
C | 0.00 | 25.00 | – | 0.00 | C | 9.15 | 6.70 | – | 9.15 |
G | 25.00 | 0.00 | 0.00 | – | G | 6.70 | 9.15 | 9.15 | – |
Glutamine | Threonine | ||||||||
A | – | 0.00 | 0.00 | 25.00 | A | – | 5.15 | 5.15 | 14.70 |
U | 0.00 | – | 25.00 | 0.00 | U | 5.15 | – | 14.70 | 5.15 |
C | 0.00 | 25.00 | – | 0.00 | C | 5.15 | 14.70 | – | 5.15 |
G | 25.00 | 0.00 | 0.00 | – | G | 14.70 | 5.15 | 5.15 | – |
Glutamate | Tryptophan | ||||||||
A | – | 6.23 | 6.23 | 12.53 | A | – | 0.00 | 0.00 | 25.00 |
U | 6.23 | – | 12.53 | 6.23 | U | 0.00 | – | 25.00 | 0.00 |
C | 6.23 | 12.53 | – | 6.23 | C | 0.00 | 25.00 | – | 0.00 |
G | 12.53 | 6.23 | 6.23 | – | G | 25.00 | 0.00 | 0.00 | – |
Glycine | Tyrosine | ||||||||
A | – | 3.80 | 3.80 | 17.39 | A | – | 0.00 | 0.00 | 25.00 |
U | 3.80 | – | 17.39 | 3.80 | U | 0.00 | – | 25.00 | 0.00 |
C | 3.80 | 17.39 | – | 3.80 | C | 0.00 | 25.00 | – | 0.00 |
G | 17.39 | 3.80 | 3.80 | – | G | 25.00 | 0.00 | 0.00 | – |
Histidine | Valine | ||||||||
A | – | 8.34 | 8.34 | 8.33 | A | – | 5.45 | 5.45 | 14.10 |
U | 8.34 | – | 8.33 | 8.34 | U | 5.45 | – | 14.10 | 5.45 |
C | 8.34 | 8.33 | – | 8.34 | C | 5.45 | 14.10 | – | 5.45 |
G | 8.33 | 8.34 | 8.34 | – | G | 14.10 | 5.45 | 5.45 | – |
Isoleucine | Overall | ||||||||
A | – | 8.60 | 8.60 | 7.80 | A | – | 5.15 | 5.15 | 14.71 |
U | 8.60 | – | 7.80 | 8.60 | U | 5.15 | – | 14.71 | 5.15 |
C | 8.60 | 7.80 | – | 8.60 | C | 5.15 | 14.71 | – | 5.15 |
G | 7.80 | 8.60 | 8.60 | – | G | 14.71 | 5.15 | 5.15 | – |
Leucine | Â | ||||||||
A | – | 6.56 | 6.56 | 11.88 | |||||
U | 6.56 | – | 11.88 | 6.56 | |||||
C | 6.56 | 11.88 | – | 6.56 | |||||
G | 11.88 | 6.56 | 6.56 | – | |||||