From: Comparative transcriptomics identifies patterns of selection in roses
Species | Sample | Repetition | Reads number | Reads bases (nt) | Q20 (%) | Accession code |
---|---|---|---|---|---|---|
Rosa wichuriana ‘Basye’s Thornless’ (BT) | SAMa | Total | 156,722,692 | 14,104,983,240 | 95.8 | _ |
Rep1 | 51,669,692 | 4,650,272,280 | Â | SAMN07808870 | ||
Rep2 | 53,341,618 | 4,800,745,620 | Â | SAMN07808871 | ||
Rep3 | 51,710,726 | 4,653,965,340 | Â | SAMN07808872 | ||
leaf_novb | Total | 131,025,452 | 18,923,248,232 | 95.8 | _ | |
Rep1 | 42,294,066 | 6,100,424,928 | Â | SAMN07808867 | ||
Rep2 | 42,725,012 | 6,170,189,794 | Â | SAMN07808868 | ||
Rep3 | 46,006,374 | 6,652,633,510 | Â | SAMN07808869 | ||
leaf_marb | Total | 134,110,978 | 19,389,814,312 | 96.1 | _ | |
Rep1 | 44,236,512 | 6,418,203,960 | Â | SAMN07808864 | ||
Rep2 | 46,651,880 | 6,762,697,476 | Â | SAMN07808865 | ||
Rep3 | 43,222,586 | 6,208,912,876 | Â | SAMN07808866 | ||
Rosa chinensis ‘Old Blush’ (OB) | SAMa | Total | 159,834,774 | 14,385,129,660 | 95.3 | _ |
Rep1 | 52,443,532 | 4,643,438,236 | Â | SAMN07808861 | ||
Rep2 | 53,284,740 | 4,800,745,624 | Â | SAMN07808862 | ||
Rep3 | 54,106,502 | 4,940,945,800 | Â | SAMN07808863 | ||
leaf_novb | Total | 137,399,212 | 19,719,505,590 | 95.8 | _ | |
Rep1 | 44,950,340 | 6,501,086,190 | Â | SAMN07808858 | ||
Rep2 | 45,260,556 | 6,426,857,278 | Â | SAMN07808859 | ||
Rep3 | 47,188,316 | 6,791,562,122 | Â | SAMN07808860 | ||
leaf_marb | Total | 130,341,518 | 18,669,073,728 | 96.7 | _ | |
Rep1 | 42,299,982 | 6,021,996,256 | Â | SAMN07808855 | ||
Rep2 | 43,001,278 | 6,170,274,204 | Â | SAMN07808856 | ||
Rep3 | 45,040,258 | 6,476,803,268 | Â | SAMN07808857 | ||
all other datac | Â | 550,108,308 | 63,356,156,640 | 95.6 | _ |