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Fig. 2 | BMC Plant Biology

Fig. 2

From: An integrated omics analysis reveals molecular mechanisms that are associated with differences in seed oil content between Glycine max and Brassica napus

Fig. 2

Phylogenetic tree and gene motif analysis of PEPC gene family. a Phylogenetic tree of PEPC gene family is constructed from the complete alignment of 33 PEPC protein sequences in Arabidopsis, soybean, and rapeseed using the neighbor-joining method with 1000 bootstrap replicates with the MEGA 7.0 software program. The bootstrap scores are indicated on the nodes, and the 4 PEPC branches, all of which are based on Arabidopsis PEPC orthologous genes, are indicated in four color boxes. The representative gene of each branch is shown followed by an additional abbreviation. b Conserved domains analysis of PEPCs. The domains of soybean genes in AtPEPC3 branch are relatively more conservative compared with rapeseed genes. And the domains of rapeseed genes in AtPEPC1 and AtPEPC2 branches are relatively conservative. However, the differences of gene domain in the bacterial AtPEPC4 branch are significant between soybean and rapeseed

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BMC Plant Biology

ISSN: 1471-2229

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