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Table 1 Characteristics of the putative cotton GSK genes

From: Genome-wide characterization and phylogenetic analysis of GSK gene family in three species of cotton: evidence for a role of some GSKs in fiber development and responses to stress

Subfamily Gene ID Proposed name Amino acid length MW (KDa) PI Subcellular location Location
Clade I Gh_D11G2830 GhSK11 407 46.20 8.59 Cyto_Nucl_Memb D24: 58071261–58,074,075(−)
Gh_A11G3270 GhSK12 407 46.20 8.59 Cyto_Nucl_Memb Scaf3045_A11: 160892–163,705(−)
Gh_A12G1106 GhSK13 409 46.41 8.69 Cyto_Nucl_Memb A12: 64114146–64,116,909(+)
Gh_D12G1230 GhSK14 409 46.31 8.58 Cyto_Nucl_Memb D25: 40170076–40,172,846(+)
Ga11G0763 GaSK11 407 46.23 8.59 Cyto_Nucl_Memb Ga11:13088074–13,090,884(+)
Ga12G1683 GaSK12 409 46.37 8.58 Cyto_Nucl_Memb Ga12:26213850–26,216,616(+)
Gorai.007G308500.1 GrSK11 407 46.20 8.59 Cyto_Nucl_Memb Gr07:52192786–52,197,103(−)
Gorai.007G308500.3 GrSK11–1 407 46.20 8.59 Cyto_Nucl_Memb Gr07:52192786–52,197,103(−)
Gorai.008G136600.1 GrSK12 409 46.36 8.58 Cyto_Nucl_Memb Gr08:38585110–38,589,107(+)
Clade II Gh_D06G2142 GhSK21 381 43.24 8.74 Cyto_Nucl_Memb D19:63261021–63,263,915(−)
Gh_D09G2469 GhSK22 382 43.10 8.74 Cyto_Nucl_Memb Scaf4332_D22:137949–141,233(−)
Gh_D09G2468 GhSK23 381 43.38 8.83 Cyto_Nucl_Memb Scaf4332_D22:123124–126,295(−)
Gh_A09G0713 GhSK24 381 43.32 9.02 Cyto_Nucl_Memb A09:52861382–52,864,569(+)
Gh_A09G0712 GhSK25 376 42.64 8.88 Cyto_Nucl_Memb A09:52841598–52,844,894(+)
Gh_A06G2020 GhSK26 385 43.72 8.69 Cyto_Nucl_Memb Scaf1340_A06:43052–45,877(+)
Ga06G2433 GaSK21 381 43.24 8.74 Cyto_Nucl_Memb Ga06:130210718–130,213,627(+)
Ga09G0899 GaSK22 376 42.59 8.84 Cyto_Nucl_Memb Ga09:59971361–59,974,663(+)
Ga09G0900 GaSK23 382 43.55 8.89 Cytoplasmic Ga09:59988594–59,991,790(+)
Gorai.010G241600.3 GrSK21 381 43.24 8.74 Cyto_Nucl_Memb Gr10:61087060–61,090,705(−)
Gorai.010G241600.2 GrSK21–1 381 43.24 8.74 Cyto_Nucl_Memb Gr10:61085419–61,090,069(−)
Gorai.006G089300.1 GrSK22 382 43.22 8.74 Cyto_Nucl_Memb Gr06:32530678–32,535,037(+)
Gorai.006G089300.2 GrSK22–1 381 43.10 8.74 Cyto_Nucl_Memb Gr06:32530521–32,535,037(+)
Gorai.006G089400.1 GrSK23 381 43.34 8.74 Cyto_Nucl_Memb Gr06:32546669–32,551,023(+)
Clade III Gh_A08G0285 GhSK31 469 52.95 8.75 Cyto_Nucl_Memb A08:3329052–3,334,479(−)
Gh_D08G1440 GhSK32 471 53.14 8.38 Cyto_Nucl_Memb D21:47361120–47,366,590(+)
Gh_D11G0907 GhSK33 470 53.00 7.27 Cyto_Nucl_Memb D24:7839230–7,844,650(+)
Gh_A08G1158 GhSK34 471 53.06 8.2 Cyto_Nucl_Memb A08:81021333–81,025,764(+)
Gh_A11G0778 GhSK35 470 52.87 6.81 Cyto_Nucl_Memb A11:7649123–7,654,545(+)
Gh_D08G0378 GhSK36 494 55.85 8.99 Cyto_Nucl_Memb D21:3871236–3,880,133(−)
Ga08G0389 GaSK31 469 52.95 8.2 Cyto_Nucl_Memb Ga08:4054818–4,060,304(−)
Ga11G3164 GaSK32 470 52.88 7 Cyto_Nucl_Memb Ga11:116299523–116,304,934(−)
Ga08G1552 GaSK33 471 53.10 8.2 Cyto_Nucl_Memb Ga08:103960877–103,965,308(+)
Gorai.004G042400.1 GrSK31 469 52.97 8.86 Cyto_Nucl_Memb Gr04:3659148–3,665,477(−)
Gorai.007G096100.1 GrSK32 470 53.04 7.6 Cyto_Nucl_Memb Gr07:7076952–7,083,244(+)
Gorai.004G156700.2 GrSK33 415 47.04 8.21 Cyto_Nucl_Memb Gr04:44445510–44,453,846(+)
Clade IV Gh_A01G1558 GhSK41 422 47.85 8.63 Cyto_Nucl_Memb A01:92410497–92,413,873(+)
Gh_D01G1809 GhSK42 422 47.85 8.63 Cyto_Nucl_Memb D14:55472543–55,475,936(+)
Gh_D12G0407 GhSK43 422 47.90 8.49 Cyto_Nucl_Memb D25:6533937–6,537,332(−)
Gh_A12G0411 GhSK44 422 47.87 8.49 Cyto_Nucl_Memb A12:8244999–8,248,430(−)
Ga02G1328 GaSK41 422 47.84 8.63 Cyto_Nucl_Memb Ga02:91572951–91,576,357(+)
Ga12G2665 GaSK42 439 50.02 8.68 Cyto_Nucl_Memb Ga12:98904726–98,909,799(−)
Gorai.002G218100.1 GrSK41 422 47.85 8.63 Cyto_Nucl_Memb Gr02:56980865–56,985,951(+)
Gorai.008G045800.6 GrSK42 422 47.89 8.49 Cyto_Nucl_Memb Gr08:6198704–6,202,924(−)
Gorai.008G045800.3 GrSK42–1 422 47.89 8.49 Cyto_Nucl_Memb Gr08:6198649–6,203,828(−)
Gorai.008G045800.2 GrSK42–2 422 47.89 8.49 Cyto_Nucl_Memb Gr08:6198649–6,203,828(−)