Table 2 Summary of the sequencing data and transcriptome assembly of N. caudatum
Sample name | Reads Number | Bases(bp) | Q20% | Q30% | GC% | Clean Reads% | Clean data% |
|---|---|---|---|---|---|---|---|
NCG3 | 42,453,220 | 6,367,983,000 | 96.200% | 96.750% | 52.348% | 98.25% | 97.55% |
NCG3-1 | 44,398,646 | 6,659,796,700 | 98.410% | 97.010% | 55.522% | 99.52% | 97.86% |
NCG3-2 | 47,613,018 | 7,141,952,700 | 98.630% | 92.400% | 55.249% | 99.62% | 97.82% |
NCG4 | 41,465,990 | 6,219,898,500 | 96.450% | 96.710% | 56.525% | 98.33% | 97.53% |
NCG4-1 | 43,498,292 | 6,524,743,800 | 98.440% | 96.400% | 57.546% | 99.42% | 97.77% |
NCG4-2 | 44,286,814 | 6,643,022,100 | 98.370% | 92.700% | 57.552% | 99.51% | 97.81% |
NCG5 | 45,271,522 | 6,790,728,300 | 96.230% | 97.030% | 55.130% | 99.02% | 95.26% |
NCG5-1 | 47,142,326 | 7,071,348,900 | 98.670% | 97.230% | 58.820% | 99.56% | 97.37% |
NCG5-2 | 47,270,260 | 7,090,539,000 | 98.810% | 92.700% | 57.479% | 99.66% | 97.82% |
| Â | Contig | Transcript | Unigene | ||||
Sequence Number | 529,269 | 292,915 | 239,703 | ||||
Total Length (bp) | 150,731,679 | 145,105,800 | 104,677,564 | ||||
Max. Length (bp) | 35,993 | 35,993 | 35,993 | ||||
Mean Length (bp) | 284.7921926 | 495.3853507 | 436.6969291 | ||||
N50 (bp) | 313 | 599 | 465 | ||||
N50 Sequence No. | 113,058 | 59,215 | 54,084 | ||||
N90 (bp) | 147 | 238 | 230 | ||||
N90 Sequence No. | 402,463 | 226,680 | 191,049 | ||||
GC% | 46.5% | 46.23% | 46.91% | ||||