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Table 1 Origin and nature of the molecular markers used to construct the genetic linkage map

From: QTL detection for growth and latex production in a full-sib rubber tree population cultivated under suboptimal climate conditions

Initial name Marker Library Type Sequencing method Reference Genotyping Technology Genotyped markers Mapped markers
a, A, T, TAs SSR Enriched genomic library Sanger Le Guen et al. (2011) [11] LI-COR 4300 DNA Analyzer 184 177
HBE SSR EST library Sanger Feng et al. (2009) [50] Silver staining on acrylamide gels 58 58
EHB SSR EST library Sanger Silva et al. (2014) [17] LI-COR 4300, silver staining, Advance 50 49
HB SSR Enriched genomic library Sanger Souza et al. (2009) [62]
Mantello et al. (2012) [63]
Silver staining on acrylamide gels 64 62
SSH SSR SSH libraries Sanger Cubry et al. (2014) [49] ABI 3500 xL Genetic Analyzer 6 6
HV SSR GenBank Nucleotide Sanger Gouvêa et al. (2010) [51] Silver staining on acrylamide gels 2 2
      sub-total SSRs 364 354
Hb_seq_ SNP RNA-seq GAIIx, Illumina This paper Mass Array Analyzer, Sequenom 105 72
sHbUNI SNP RNA-seq and genomic library GAIIx, Illumina Mantello et al. (2014) [16], Souza et al. (2016) [64] Fluidigm, BioMark HD 21 19
sHbCIR SNP RNA-seq 454-Roche Salgado et al. (2014) [22] Fluidigm, BioMark HD 65 60
      sub-total SNPs 191 151
      Total 555 505