Table 4 Association analysis of plant height under common bunt infection using the mixed linear model (MLM) using TASSEL 5.2 software based on Bonferroni correction (α = 0.05) and false discover rate (α = 0.05)
From: Genetic architecture of common bunt resistance in winter wheat using genome-wide association study
SNP ID | Chro. | p-value | Target allele (1) | Allele effect (2) | R2 (3) (%) |
|---|---|---|---|---|---|
S1A_39183276 | 1A | 8.22E-06 | C:T | 4.04 | 7.67 |
S1A_40498783 | 1A | 1.55E-05 | G:T | 3.82 | 7.83 |
S1A_40498796 | 1A | 1.55E-05 | G:A | 3.82 | 7.83 |
S4B_28403490* | 4B | 1.45E-06 | G:T | 5.85 | 8.75 |
S4B_36090153 | 4B | 1.44E-05 | A:G | 5.15 | 7.88 |
S5B_533748253* | 5B | 1.13E-06 | A:T | 8.36 | 8.25 |
S5B_533748257* | 5B | 1.13E-06 | G:C | 8.36 | 8.25 |
S5B_565504007* | 5B | 1.19E-06 | C:T | 8.87 | 10.04 |