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Table 1 List of MdHMs gene families in the apple genome

From: Identification and characterization of histone modification gene family reveal their critical responses to flower induction in apple

Gene Name Gene Locusa CDS/bp Strand
SDG gene family
MdSDG01 MD00G1030500 1515 +
MdSDG02 MD00G1060700 2277 +
MdSDG03 MD00G1068300 2148 +
MdSDG04 MD00G1179500 1875
MdSDG05 MD01G1012000 1149 +
MdSDG06 MD01G1080200 3231
MdSDG07 MD01G1116500 1371
MdSDG08 MD01G1220300 3249
MdSDG09 MD01G1224300 1062
MdSDG10 MD02G1157000 4524
MdSDG11 MD02G1174900 478
MdSDG12 MD02G1195100 1212
MdSDG13 MD02G1265700 2253
MdSDG14 MD02G1267300 2070
MdSDG15 MD02G1278400 3564 +
MdSDG16 MD03G1258900 891
MdSDG17 MD03G1294100 2451 +
MdSDG18 MD04G1028500 1623
MdSDG19 MD04G1052400 3861 +
MdSDG20 MD04G1231900 1740
MdSDG21 MD05G1027900 2019 +
MdSDG22 MD05G1031300 781 +
MdSDG23 MD05G1244800 768 +
MdSDG24 MD07G1051900 2067 +
MdSDG25 MD07G1058000 1611 +
MdSDG26 MD07G1058100 1839
MdSDG27 MD07G1289800 3225 +
MdSDG28 MD08G1159600 6348 +
MdSDG29 MD09G1002600 2031 +
MdSDG30 MD09G1103200 7443 +
MdSDG31 MD09G1105100 1446 +
MdSDG32 MD09G1129500 1686
MdSDG33 MD10G1032900 3441 +
MdSDG34 MD10G1226200 1467 +
MdSDG35 MD11G1279700 3213
MdSDG36 MD12G1009500 1035
MdSDG37 MD12G1043600 429
MdSDG38 MD12G1052100 990 +
MdSDG39 MD12G1112200 2115
MdSDG40 MD12G1250000 753
MdSDG41 MD13G1020900 1437 +
MdSDG42 MD13G1069000 1635 +
MdSDG43 MD13G1130100 2043
MdSDG44 MD13G1134900 2019
MdSDG45 MD13G1224000 1893
MdSDG46 MD13G1279000 2406 +
MdSDG47 MD14G1101300 1524
MdSDG48 MD15G1130200 6231 +
MdSDG49 MD15G1133700 6369
MdSDG50 MD15G1141800 1167
MdSDG51 MD15G1271600 4518
MdSDG52 MD15G1285900 2793
MdSDG53 MD15G1338000 1146
MdSDG54 MD15G1356600 1443
MdSDG55 MD16G1019300 1452 +
MdSDG56 MD16G1067900 1476
MdSDG57 MD16G1130300 2013
MdSDG58 MD16G1130700 1242
MdSDG59 MD16G1228800 2043
MdSDG60 MD16G1258900 1473 +
MdSDG61 MD17G1006800 2161 +
MdSDG62 MD17G1091000 7386 +
MdSDG63 MD17G1118300 1493
MdSDG64 MD17G1287300 1446
PRMT gene family
MdPRMT01 MD02G1037100 1152 +
MdPRMT02 MD08G1132700 1650 +
MdPRMT03 MD13G1168500 1638
MdPRMT04 MD15G1111800 726
MdPRMT05 MD15G1112100 1950
MdPRMT06 MD15G1112600 1266
MdPRMT07 MD15G1177300 1149 +
HDMA gene family
MdHDMA01 MD00G1030000 2382 +
MdHDMA02 MD00G1041900 2361 +
MdHDMA03 MD00G1206800 1320 +
MdHDMA04 MD01G1103000 2712
MdHDMA05 MD03G1220300 2247
MdHDMA06 MD05G1067900 3012
MdHDMA07 MD05G1344100 1446
MdHDMA08 MD06G1137800 1692 +
MdHDMA09 MD08G1004400 2448 +
MdHDMA10 MD08G1017300 5703 +
MdHDMA11 MD10G1077800 3000
MdHDMA12 MD10G1320100 1497
MdHDMA13 MD14G1152600 1638 +
MdHDMA14 MD15G1003800 2448 +
MdHDMA15 MD15G1016200 5337 +
MdHDMA16 MD15G1018300 2355 +
JMJ gene family
MdJMJ01 MD00G1097500 3129
MdJMJ02 MD00G1097600 564
MdJMJ03 MD01G1082300 3300
MdJMJ04 MD01G1106000 4812
MdJMJ05 MD01G1218500 4560 +
MdJMJ06 MD04G1202800 1803 +
MdJMJ07 MD04G1229800 3648
MdJMJ08 MD05G1326700 3075
MdJMJ09 MD05G1351300 2664
MdJMJ10 MD06G1012500 3141
MdJMJ11 MD06G1026100 2673 +
MdJMJ12 MD06G1159300 4404
MdJMJ13 MD06G1081900 5532
MdJMJ14 MD07G1099600 3702
MdJMJ15 MD07G1172400 4785
MdJMJ16 MD08G1186800 2946 +
MdJMJ17 MD10G1304800 3093
MdJMJ18 MD10G1182700 2658 +
MdJMJ19 MD10G1241100 3123
MdJMJ20 MD10G1325700 2070
MdJMJ21 MD12G1046300 1551
MdJMJ22 MD12G1216600 2841 +
MdJMJ23 MD12G1246900 3711
MdJMJ24 MD14G1103700 5529
MdJMJ25 MD14G1165600 4401
MdJMJ26 MD14G1175900 1425 +
MdJMJ27 MD15G1372700 2928 +
MdJMJ28 MD16G1280000 2667
HAG gene family
MdHAG01 MD01G1105800 702
MdHAG02 MD01G1108300 885
MdHAG03 MD01G1237100 855 +
MdHAG04 MD02G1072700 1425
MdHAG05 MD02G1091000 867
MdHAG06 MD02G1183200 1251
MdHAG07 MD02G1187100 1872
MdHAG08 MD02G1300400 645
MdHAG09 MD02G1300500 663
MdHAG10 MD03G1064100 1173 +
MdHAG11 MD03G1263400 525 +
MdHAG12 MD04G1177300 282 +
MdHAG13 MD04G1217600 507 +
MdHAG14 MD05G1042000 303 +
MdHAG15 MD06G1040400 462
MdHAG16 MD06G1234100 810
MdHAG17 MD07G1016800 411
MdHAG18 MD07G1016300 411
MdHAG19 MD07G1023300 615 +
MdHAG20 MD07G1174400 891
MdHAG21 MD07G1238600 855
MdHAG22 MD07G1309700 852 +
MdHAG23 MD08G1142000 255
MdHAG24 MD09G1002300 632
MdHAG25 MD09G1120700 600
MdHAG26 MD09G1224900 1231 +
MdHAG27 MD09G1249800 492 +
MdHAG28 MD10G1193500 1653
MdHAG29 MD11G1067900 1179 +
MdHAG30 MD11G1284200 525 +
MdHAG31 MD12G1036200 297 +
MdHAG32 MD12G1192400 747 +
MdHAG33 MD12G1234800 582 +
MdHAG34 MD13G1053400 579 +
MdHAG35 MD13G1088000 1092 +
MdHAG36 MD13G1155300 1173 +
MdHAG37 MD13G1195500 666
MdHAG38 MD13G1195600 222 +
MdHAG39 MD14G1023000 462 +
MdHAG40 MD14G1163700 1695 +
MdHAG41 MD14G1240800 693
MdHAG42 MD15G1118400 489 +
MdHAG43 MD15G1202500 1425
MdHAG44 MD15G1217100 1023
MdHAG45 MD15G1295100 1251 +
MdHAG46 MD15G1298200 1860
MdHAG47 MD16G1088300 1035 +
MdHAG48 MD16G1196400 459 +
MdHAG49 MD16G1196500 561 +
MdHAG50 MD16G1262600 792
HAM gene family
MdHAM01 MD08G1173300 1465 +
MdHAM02 MD15G1358600 1338 +
HAC gene family
MdHAC01 MD09G1082800 3288 +
MdHAC02 MD09G1170000 5244
MdHAC03 MD17G1073200 4473 +
MdHAC04 MD17G1157200 2616 +
HAF gene family
MdHAF01 MD04G1047300 5601 +
HDA gene family
MdHDA01 MD01G1005700 1338
MdHDA02 MD03G1137300 1389 +
MdHDA03 MD03G1154900 1149
MdHDA04 MD04G1077800 387 +
MdHDA05 MD05G1146000 1488 +
MdHDA06 MD05G1147700 297 +
MdHDA07 MD05G1149000 1008 +
MdHDA08 MD06G1167500 1413 +
MdHDA09 MD06G1202300 2004 +
MdHDA10 MD06G1211800 1722
MdHDA11 MD08G1043300 1203 +
MdHDA12 MD10G1145400 1488 +
MdHDA13 MD11G1159400 1293 +
MdHDA14 MD14G1173000 1407 +
MdHDA15 MD14G1211400 2001 +
MdHDA16 MD14G1222300 1722
SRT gene family
MdSRT01 MD00G1091800 1416 +
MdSRT02 MD03G1179400 1454 +
MdSRT03 MD11G1199100 1416 +
HDT gene family
MdHDT01 MD03G1134300 624
MdHDT02 MD03G1134400 321
MdHDT03 MD11G1156500 594
MdHDT04 MD11G1156600 321
MdHDT05 MD12G1016900 521
MdHDT06 MD12G1017000 315
MdHDT07 MD14G1014900 642
  1. aGene ID in the apple (Malus × domestica) genome (Malus domestica Genome GDDH13 Version 1.1);