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Table 7 Details of quantitative trait loci identified for different traits in PR-15 population in repeated tests

From: Construction of high-density linkage maps for mapping quantitative trait loci for multiple traits in field pea (Pisum sativum L.)

Linkage group Trait Station/year QTL interval (cM) Flanking markers LOD Add. Effecta % phenotypic variance explained
LG1b Yield (g/m2) 2012 Sutherland 18.5–20.2 PsC10747p192 - Sc1080_21315 3.39 37.08 9.24
LG1b Yield (g/m2) 2012 Rosthern 19.0–20.8 Sc8907_136614 - Sc4727_127502 3.16 19.16 6.71
LG3a Yield (g/m2) 2012 Sutherland 0–1.0 PsC7190p130 - Sc6503_79334 5.45 −49.29 17.93
LG3a Yield (g/m2) 2013 Rosthern 28.1–29.5 Sc11611_93482 - Sc1978_161130 3.11 40.03 10.19
LG3a Yield (g/m2) 2012 Rosthern 58.1–63.8 Sc14164_1954 - Sc8290_63040 9.06   9.65
LG3a Plant height (cm) 2013 Sutherland 98.5–115.3 Sc3030_71736 - Sc5836_42661 6.07 −2.34 16.65
LG3a Plant height (cm) 2012 Rosthern 98.5–115.5 Sc3030_71736 - Sc5836_42661 12.99 −3.4 27.39
LG3a Plant height (cm) 2013 Rosthern 98.8–115.4 Sc3030_71736 - Sc5836_42661 12.94 −3.86 33.3
LG3a Lodging resistance (1–9) 2012 Sutherland 99.2–115.1 Sc3030_71736 - Sc5836_42661 9.15 0.43 31.3
LG3a Days to maturity 2012 Rosthern 104.4–113.2 Sc3030_71736 - PsC17710p220 4.71 −0.97 15.04
LG3a Lodging resistance (1–9) 2012 Rosthern 105.3–113.9 Sc3030_71736 - Sc5836_42661 8.83 0.61 28.5
LG3a Yield (g/m2) 2013 Rosthern 120.4–127.9 Sc7171_14359 - Sc2661_275495 4.77 −49.04 15.09
LG3a Days to maturity 2013 Rosthern 126.6 - 130.3 PsC13164p99 - Sc9107_65749 5.79 −0.57 18.00
LG3a Days to flowering 2012 Rosthern 130.8–138.9 Sc9107_65749 - Sc9194_30175 4.69 −0.28 15.31
LG3a Days to maturity 2012 Rosthern 139.4–142.0 Sc9194_30175 - PsC19244p283 3.33 −0.82 10.05
LG3a Days to flowering 2013 Sutherland 140.3–142.7 Sc9194_30175 - Sc12608_67073 4.58 −0.36 11.63
LG3a Yield (g/m2) 2013 Sutherland 140.7–141.0 PsC11929p181 - Sc1333_166281 4.67 −38.53 13.02
LG3a Days to maturity 2012 Sutherland 141.0–143.1 PsC11929p181 - Sc12608_67073 3.51 −0.51 10.88
LG3a Days to maturity 2013 Sutherland 141.5–144.4 Sc1333_166281 - Sc5805_247604 3.76 −0.33 7.98
LG3a Plant height (cm) 2012 Sutherland 143.1–146.7 Sc12608_67073 - Sc6140_92759 4.35 −2.74 13.8
LG3a Plant height (cm) 2013 Sutherland 148.6–152.7 Sc6140_92759 - PsC13040p226 3.47 −1.7 9.22
LG5 Days to maturity 2013 Sutherland 3.6–6.6 PsC20318p230 - Sc21433_13524 6.55 0.45 15.23
LG5 Days to flowering 2013 Sutherland 5.0–14.9 PsC713p412 - PsC26750p187 7.22 0.46 20.04
LG5 Days to flowering 2013 Rosthern 5.2–13.0 PsC713p412 - PsC26750p187 3.94 −0.34 14.89
LG5 Days to maturity 2013 Rosthern 6.0–11.5 PsC713p412 - PsC26750p187 3.64 0.44 11.41
LG5 Days to flowering 2012 Rosthern 91.6–94.1 Sc6512_5112 - PsC466p127 5.21 0.29 16.91
LG5 Seed phytate conc. (ppm) 2013 Rosthern 92.1–94.8 Sc12815_23289 - Sc4207_179095 6.69 −44.58 23.67
LG5 Seed phytate conc. (ppm) 2012 Rosthern 94.4–99.3 PsC466p127 - Sc15571_50927 12.48 −61.55 16.09
LG5 Days to maturity 2012 Rosthern 103.9–106.6 Sc1391_18953 - PsC11390p169 3.2 0.74 9.22
LG5 Seed phytate conc. (ppm) 2012 Sutherland 105.5–108.1 Sc19803_9214 - PsC18987p64 10.59 −60.15 31.32
LG5 Seed phytate conc. (ppm) 2013 Sutherland 105.5–108.1 Sc19803_9214 - PsC18987p64 11.37 −61.44 33.19
LG5 Days to maturity 2012 Sutherland 127.2–128.8 PsC1106p196 - Sc7339_115925 3.57 0.54 12.87
  1. Details of QTLs that were consistent on the same linkage group in atleast two of the four trials were presented
  2. aAdditive effect. Any positive value of additive effect indicates that the trait alleles are from 1 to 2347-144 and the negative additive effect indicates the trait alleles are from CDC Meadow